Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3649 ATGGCTTTCAACTCTTCGCTTCGTCTTCCTTCCTCTTCCCAATATTACTCACACTTTTGCTCTGTTAGGTTCAAATACAGCAAGCTTCACAATGTTCATAGCCAAATAGATTTGGTGACAACCAAAAAGAGAAAATGTTGTATTAAGTCAATACTGAATGATAATAGGCCAAGCATCAACGACTATGGAGCTGCTAAATCTGCAAGGCTGCTCCTTGAAAAGCTGTTTGAGCAAGCACAGAAGCTGGAACATCAGATGGCAACTGGGGYCACAGGCGAGTCTTAYGRTGGTGAAGATGCTCAGCTAGCTTACAATCTTAGCATGCTTGAGTCGGATCTTCAGGCTGCACTCAGGGAATTGATAARGAAGGAAGAGCATCTGMTGGAGRTAGAGAGGAYGGTTATTTTGGAGAGCACTGAGTTGAARCACACAAAGGAAGAGTTGGAGCAACAGGAGAGGGAAATTGCGGCTGCTCGCACCAAGTATGAGAAGCTGGAAGAGGAGATGAAGGAAGCTAAGACTAACTTGGTTTCTCAAGCAGGTCAGATGGAGGTACTGAAGCTCCTTCTCAGGGAGCGTGATCAAGAGGTTGCTACCATGAAGAGGGCACTGTCCTTGAAGGAGGCAGAAGTGGAGCAAATGAAGATTGACKTGGTGAAGAAGAGTGAAGAAGCAGCAMYTSTTGATGCTGAGCTTAAACAGAAAGCTCAACTTTTGATTGAAACAAATGAGGTTATGAACAAACAAAAAATTGAGCTTCAAGAACTCCAGAAGGCTGTCCATGTAAAAGAACAGGAACTTGAGGTTTCGCTGACTCAGAGGAAGTTCGAAGAAGAAAAACTGAAGTCTGCCGAGGCTACCTTGGAGCAGCAGGCAATGGAATGGTTGTTGGCACAGGAGGAACTTAAGCGGTTGGGAGAGGATGCTTCTAGACACGTGCAGGAGAGTAATGAGACTCTGGAAGATTTCAGAAGGGTGAAGAAGCTTCTCAGTGATGTGAGGTCTGAATTGGTTTCTTCTCAGCAATCACTCGCATCTTCTAGAGGCAAAATGGAGGAACAAGAGCGGTTGTTGGAGCAGCAGCTGTCTGAACTTGCTGAGCAAAGGGAAAATGTCATGTCATACATGGCAAGTTTGAACGATGCTCAAGTAGAAGTGGAAGGTGAGCGAGCGAAACTTAGGATTGCAGAGGCCCGGAACAGAGAACTCGAACGGGATTTAACTATGGAAAAGGAGCTTGTGGTGAAGTTACTAGAGGAGCTGAGGAATGAGGGAACAACTTTGAAGCATGCAGTTAGAGAAGTTTCTTTCCTTCAACAAGAATTAGAGAAAAAAAGTACTGAGTTTAATGAAACAAGTGCCATTCTTCATGCTAAAGAAACGGAGCTCGTTGATGCTAAGATGGAAATCCAGCATTTCAAATCTGAAAAGGCTTCTCTTCAGGCTATCTTGGAGGAGAAAGACTTGGAACTTTCTAAAGCTAGGAAGACGTTGGCAGAAGTAAACAATGAAATCTCTGATCTCAAGCTGCTCTTGAGGGACAAAGAAGCACAACTTATTGAAGCAACCTGTTCGCTGAAGGAGAAAGATGAGCGTGTTAAAGCGGTCGAGAACATATTAAAAGACACAAACCTGAAAGCTTCCCAGGCTGAAGCTGTATTAGAAAAAATCTTAGATGTTACAAACAAACTGGTTGCTTCCATAAAGGATGAAGATATTAACTCATCAAGAGCACTACATGAAGAGGGCAGTGAACTACTTGAGCAACTAATCAAGGAACCGGATAATGAAGTGAGGTGGCAGCAAAAACGGCTTGAGAGTGAGCTTCAGTTAACCAAAGACAACTTAAAAGCAAAGGAGATGGAGGTTCTGGCCGCACACAGGGCTCTAACAATAAAAGATGAGGAGCTCAAAATGACACTTGCAAGGTTGGATGCAAAGGAGGAAGAGTTAAAGAAAGTAAGGGAAAAGTTAACCGAAGACACAAATGATCTCAAAAGGCGGTATGCCTTGACGCAGGAGAAAATTGGTGAGAACAGCATGGAAGATTTGGCAGTTGAGAGACTTCAGCTGGAAGCAGCTCAGTCGGAAGTTGAAGCTGCCACTAGCGCTTTACATAAACTCGCAGAAATGAGACGACAACTATTGACCAAGGCTATCGGTATTTACCAAAACCCTGATTCGATGACCGACTTGAACAACGCCTGTTTTGCTGAGGTAAAAGAAGGAATTGCTAGACTCTCAGCTATGACTGATCAACTTGTGAGGGAGGTAGGTATTGTTTCTGCAAAATAG 2295 0.4357 MAFNSSLRLPSSSQYYSHFCSVRFKYSKLHNVHSQIDLVTTKKRKCCIKSILNDNRPSINDYGAAKSARLLLEKLFEQAQKLEHQMATGXTGESYXGEDAQLAYNLSMLESDLQAALRELIXKEEHLXEXERXVILESTELKHTKEELEQQEREIAAARTKYEKLEEEMKEAKTNLVSQAGQMEVLKLLLRERDQEVATMKRALSLKEAEVEQMKIDXVKKSEEAAXXDAELKQKAQLLIETNEVMNKQKIELQELQKAVHVKEQELEVSLTQRKFEEEKLKSAEATLEQQAMEWLLAQEELKRLGEDASRHVQESNETLEDFRRVKKLLSDVRSELVSSQQSLASSRGKMEEQERLLEQQLSELAEQRENVMSYMASLNDAQVEVEGERAKLRIAEARNRELERDLTMEKELVVKLLEELRNEGTTLKHAVREVSFLQQELEKKSTEFNETSAILHAKETELVDAKMEIQHFKSEKASLQAILEEKDLELSKARKTLAEVNNEISDLKLLLRDKEAQLIEATCSLKEKDERVKAVENILKDTNLKASQAEAVLEKILDVTNKLVASIKDEDINSSRALHEEGSELLEQLIKEPDNEVRWQQKRLESELQLTKDNLKAKEMEVLAAHRALTIKDEELKMTLARLDAKEEELKKVREKLTEDTNDLKRRYALTQEKIGENSMEDLAVERLQLEAAQSEVEAATSALHKLAEMRRQLLTKAIGIYQNPDSMTDLNNACFAEVKEGIARLSAMTDQLVREVGIVSAK* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3649 764 Coils Coil 65 85 - -
Amo16g3649 764 Coils Coil 239 294 - -
Amo16g3649 764 Coils Coil 684 711 - -
Amo16g3649 764 Coils Coil 129 129 - -
Amo16g3649 764 Coils Coil 637 675 - -
Amo16g3649 764 Coils Coil 131 132 - -
Amo16g3649 764 Coils Coil 106 121 - -
Amo16g3649 764 Coils Coil 456 546 - -
Amo16g3649 764 Coils Coil 602 622 - -
Amo16g3649 764 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 38 760 - -
Amo16g3649 764 Coils Coil 344 420 - -
Amo16g3649 764 Coils Coil 428 448 - -
Amo16g3649 764 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 38 760 - -
Amo16g3649 764 Coils Coil 134 182 - -
Amo16g3649 764 Coils Coil 123 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3649 Amo-Chr16 147265913 147269244 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3649 - - lang:109350731 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3649 16 147265913 147269244 Amo16g3649 16 147265913 147269244 ECH
Amo16g3649 16 147265913 147269244 Amo06g2844 06 93808586 93812181 hybridization