Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3629 ATGTCTCAGGCCTTTGCAACTGCACTTGAGCCTTTGAAGTTACACTCATGCAGATTCACACACACCCCATCCTTCTTCTCTCTCCCTCCCTTTCCCGCCTTCAACGCCAAACCCTCTCTCACTCTCACACCTCTTCGTCTCTCTCCTTCCCACCCTCCTACTCTCACTCACATCCTCCCTTCCCGTTTTCGGACACCATGCACCACGCAAAAATCAGACATGATTTCGCAGCTTGAGATTGGGAAACCGGAGCGAATCAAGAAACCCGAGAAGCGAGTCAATGGAATATTCTGGATCATACTACTCAACATTGGCATATTCGTTGCTGACCATTTCTTTCAGGTTAATGGCATCAAATCTCTGTACCTGTACCACAACTGGCCTGCTTGGTACCAATTTGTCACAGCAACATTTTGCCATGCTAATTGGAAGCATCTTTCTAGCAACCTTTTCTTCTTGTACATTTTCGGAAAACTTGTTGAAGAAGAGGAAGGGAACTTTGCTTTGTGGCTTTCTTACATTCTTACTGGTGTTGGAGCAAACCTTGTTTCATGGTTGGTTTTACCAAGAAATACAGTTTCTGTTGGAGCTTCTGGTGCTGTTTTCGGGTTGTTTACTATCAGCGTCCTCGTAAAGATGTCCTGGGATTGGAGGAAGATCCTTGAAGTTCTAATTTTGGGTCAGTTTGTTATAGAGAAGGTGATGGAAGCAGCCCAAGCTTCAACTTCATTATCAGGAACCTTTCGCGGAGGCTACGCATTGCAGAATGTCAATCATATTGCTCATCTTTCTGGTGCTCTTGTTGGTGTTCTCTTGGTTTGGCTCCTAAGCAAAGTCCCTGCTGATCCCTCAGAACCATAA 861 0.453 MSQAFATALEPLKLHSCRFTHTPSFFSLPPFPAFNAKPSLTLTPLRLSPSHPPTLTHILPSRFRTPCTTQKSDMISQLEIGKPERIKKPEKRVNGIFWIILLNIGIFVADHFFQVNGIKSLYLYHNWPAWYQFVTATFCHANWKHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANLVSWLVLPRNTVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTSLSGTFRGGYALQNVNHIAHLSGALVGVLLVWLLSKVPADPSEP* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3629 286 SUPERFAMILY Rhomboid-like 94 280 IPR035952 -
Amo16g3629 286 Pfam Rhomboid family 130 278 IPR022764 GO:0004252|GO:0016021
Amo16g3629 286 Gene3D - 90 281 IPR035952 -
Amo16g3629 286 PANTHER RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED 55 283 - -
Amo16g3629 286 PANTHER RHOMBOID-RELATED PROTEIN 55 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3629 Amo-Chr16 146941162 146943553 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3629 - - adu:107495220 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3629 16 146941162 146943553 Amo16g3629 16 146941162 146943553 ECH