Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3624 ATGGCTTCTCTCCGGCTCCAATTCCTTCCACAAAATCCCGTTCCGTTATTCTCCAATTCCACTCTTCATTACGCTCCGCGAACTCTCTCCTTTTCGAAAGTGGAACACCGCCAACGCCGAGTGAGTGCCTTGACTTTGCAGGTGCTACTTCTCAAGTATTTGATGTTCCACTTTTATCTTGCAATGAGAGAAACAATAAAAGGCAAGCAACAATACCTTGCCATGTATTCAAGCATTTTTGGTGGGGTAACCACAGACCCTGCTGTTATGGTTATTCCTATGGACGACCACATGGTACACAGGGGCCATGGTGTCTTCGATACTGCGGCAATAATGGACGGGTACCTATATGAGCTAGATCAACACCTTGATCGCTTTTTGAGGTCAGCATCCATGTCTAAGATAGATCCTCCATTCGATCGCGAAAGCATAAGAAGAATCCTCATACAAACTCTATCCCCTGCAGGGTGCCACCAATCTTCTCTATACGCAATTGTAATACAGGATCTGTCATTGGCATCAACTAGTTCCAGGGGAGTTAAAGTTGTTACTTCATCAATACCCATTAAACCGCCACAGTTTGCAACAACTAAGAGTGTAAATTACCTCCCAAATGTGCTCTCGAAGATGGAAGCCGAAGAAGCTGGTGCCTTTGCCGGCATTTGGCTTGATCACGAGGGATTTGTTGCTGAGGGGCCTAATATGAATGTGGCTTTTGTGACTAAAGAGAAGGAGCTTATAATGCCCCACTTCGATAAAATTCTTAGTGGCTGCACAGCTAAGAGGGTTTTGACGCTTGCCGAGAAGTTGTTGAGCAAGGGTAAGCTTCGCGGGATAAGGATGAAACATGTGACTGTTGAGGAAGGAAAGAGTGCCGCTGAAATGATGCTTATTGGCAGGAAAGAAGGCCGTATAACGAAGGCTCTCTTCAATCTTATTGTTGAAGACATGGAGTCAGCACCCCCTCCAGTTCGTATACCTCTTCATGAAACAGAATGTGACAAATAA 1008 0.4524 MASLRLQFLPQNPVPLFSNSTLHYAPRTLSFSKVEHRQRRVSALTLQVLLLKYLMFHFYLAMRETIKGKQQYLAMYSSIFGGVTTDPAVMVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHLDRFLRSASMSKIDPPFDRESIRRILIQTLSPAGCHQSSLYAIVIQDLSLASTSSRGVKVVTSSIPIKPPQFATTKSVNYLPNVLSKMEAEEAGAFAGIWLDHEGFVAEGPNMNVAFVTKEKELIMPHFDKILSGCTAKRVLTLAEKLLSKGKLRGIRMKHVTVEEGKSAAEMMLIGRKEGRITKALFNLIVEDMESAPPPVRIPLHETECDK* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3624 335 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 80 315 IPR036038 GO:0003824
Amo16g3624 335 Pfam Amino-transferase class IV 104 299 IPR001544 GO:0003824
Amo16g3624 335 Gene3D - 182 306 IPR043132 -
Amo16g3624 335 PANTHER AMINO-ACID AMINOTRANSFERASE 65 150 - -
Amo16g3624 335 PANTHER AMINO-ACID AMINOTRANSFERASE 152 300 - -
Amo16g3624 335 Gene3D - 53 181 IPR043131 -
Amo16g3624 335 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 65 150 - -
Amo16g3624 335 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 152 300 - -
Amo16g3624 335 CDD PLPDE_IV 96 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3624 Amo-Chr16 146885760 146888917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3624 K18482 - gmx:100794026 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3624 16 146885760 146888917 Amo16g3624 16 146885760 146888917 ECH