Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3621 ATGGATAGCTTTAGCTTTACCTTTTTGATTTGGTGCCTTCTTGCTCTCAATCACATACTTCCGTTAACGATTCAAACCATTGAGGCTCGAATTCCAGAATCTCCACTTCAATGCAACCAAACATTTTGTATTCTCCACAACAGCTATGGAAAATGGGGTGATCGAAAAGACTGTTATGCCCTCAACGCAACCTACCCAACAACGGAACAAGAACTTCACGTGGCCGTCTCGTTTGCTGTGGAACACAATCTGAAAGTGAAGGTGGTCACAAAATTCTCACATACCATCCCCAAGCTCGCCTGCCCTGACCAAGCGGTCCAAAACAGTTTTGTTATTAGTACGGAGCGTTATAACCGTCAAATACAGATAGATGTTGCCAATTCTATTGTCACCGTTGACGCTGGTGTTGGCCTTCGCCAGTTGATTGACGCCGTTGAAGCCTCTGGGTTTAGTTTGGTGGCCTCACCTTATTGGGAAGGGGTAACAATTGGGGGACTTATTAGCACAGGGGCACATGGGAGTTCTTGGTGGGAGAAAGGTGGTTCTGTTCATGATCATGTTGTGGGGCTCAGCATCGTTGTTCCTGCTTCCAAATCTGAAGGATATGCCAAGATTTTGAGATTGGAAGCACATGATCCATTATTCAATGCTGCCAAAGCATCGCTCGGTGTCTTGGGTGCTATCTCCAAGGTAACATTAAGAGTGGAACCAAGTTTCAAAAGAAGCATAACCTACAATTTCACGTCCGATGTTGGTCTTGAAGATTTGTACGTAGATCATGCAAATAAATATGAGTTTGCAGACATAACTTGGTATCCATCACAACACACTGCTGTTTATAGATATGATTCAAGGGTTCCCTTAAATACTTCCGGTAATGCAGTCTTTGACTTCATTGGATTTCAAAATAATCCAACTTCGATCTCCGAAGCAGTTCGAGCTACAGAGAGTTTGTTAGAAAAAACAAGAAACACGCATGGGAAATGCTTAACAGCAGCAGCAACATTAGCATTTAAAAAAGCTACAGCAAATGGTTTAAAGAACAATGGCATTCTTTTCACTGGCTATCCAGTAATCGGTTACCAAAGCAAAATGCAAACCTCAGGTTCATGCTTATACTCCCAATCACTCCTCACATCATGTGCTTGGGATCCAAGAATCAAAGCCTTGTCCTTCTATGAATCCACAGCAATCTTTCCAGCTTCTATTTTCCGTGATTTCATCTTGGACGTGAAAAAGCTCAGAGACTTAAACCCGGAACATTTTTGTGGGGTTGACAACTATAACGGTATTCTTATACGTTATATCAAAGGGTCGGATGCATATTTAGGTCAATCTGAAGACTCTATAGTAATTGATTTCAATTATTATAGAGCCAAAGAGGCATCAACTCCGCGATTAAACCAAGATATTTGGGAAGAATTGGAACAAATGGCGTTTTTTAAGTATGGGGCTAAGCCACATTGGGGTAAGAATAGGAACATTGCATTCTTGGGAGTGGATAAGAAGTACCCAAATTACAACAAGTTTATTGAAGCAAAACAACAATTGGATCCACAAAATGTGTTTTCTAGTAATTGGTCTGATGAAATATTGTTTGGGAAGGAATTAGAGAAGAGTGATGGATGTGCTCTTGAAGGGTTATGCATATGTAGTGAACACAGACATTGTAGCCCACAAAACAATTATTATTGTAGCCAAGGACTTGTCTATAAGGATGCTAGGTTATACCATATGCATGACACTCAAAAATATAATTTCTTCAAAGTTTACTTCTTTCGATTCATGGCTTCACTGGAAAAATAA 1806 0.4053 MDSFSFTFLIWCLLALNHILPLTIQTIEARIPESPLQCNQTFCILHNSYGKWGDRKDCYALNATYPTTEQELHVAVSFAVEHNLKVKVVTKFSHTIPKLACPDQAVQNSFVISTERYNRQIQIDVANSIVTVDAGVGLRQLIDAVEASGFSLVASPYWEGVTIGGLISTGAHGSSWWEKGGSVHDHVVGLSIVVPASKSEGYAKILRLEAHDPLFNAAKASLGVLGAISKVTLRVEPSFKRSITYNFTSDVGLEDLYVDHANKYEFADITWYPSQHTAVYRYDSRVPLNTSGNAVFDFIGFQNNPTSISEAVRATESLLEKTRNTHGKCLTAAATLAFKKATANGLKNNGILFTGYPVIGYQSKMQTSGSCLYSQSLLTSCAWDPRIKALSFYESTAIFPASIFRDFILDVKKLRDLNPEHFCGVDNYNGILIRYIKGSDAYLGQSEDSIVIDFNYYRAKEASTPRLNQDIWEELEQMAFFKYGAKPHWGKNRNIAFLGVDKKYPNYNKFIEAKQQLDPQNVFSSNWSDEILFGKELEKSDGCALEGLCICSEHRHCSPQNNYYCSQGLVYKDARLYHMHDTQKYNFFKVYFFRFMASLEK* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3621 601 TIGRFAM pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase 32 576 IPR010030 -
Amo16g3621 601 Gene3D - 119 237 IPR016169 -
Amo16g3621 601 ProSiteProfiles PCMH-type FAD-binding domain profile. 56 238 IPR016166 GO:0071949
Amo16g3621 601 PANTHER GULONOLACTONE OXIDASE 25 578 - -
Amo16g3621 601 SUPERFAMILY FAD-binding/transporter-associated domain-like 46 237 IPR036318 GO:0050660
Amo16g3621 601 Pfam FAD binding domain 64 195 IPR006094 GO:0050660
Amo16g3621 601 Gene3D - 394 494 - -
Amo16g3621 601 Pfam D-arabinono-1,4-lactone oxidase 431 529 IPR007173 GO:0003885|GO:0016020
Amo16g3621 601 PANTHER L-GULONOLACTONE OXIDASE 5 25 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3621 Amo-Chr16 146797462 146804430 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3621 K00103 - gmx:100778616 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3621 16 146797462 146804430 Amo16g3621 16 146797462 146804430 ECH