Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3617 ATGTCCCGCGTCGCCTCCGACACCGTCGGCAATGGCGCTCTGGTCCCATTCTCCGAAGACACCAAAGACTCACTGGCGGTCTACCCTCTCCACCACGGCCTCGCCCCTCCGATTTCCCGCATTGCCATCTCCTGGGCCCGCGGCAACTCCCTCCGCGTCTCCCTCTTCGTCACTCCCTCTTCAGAACCTTCTCAAACCCCGCAGGATCAGTCTGGAGGTAAGGTCCTCGAAGTTAAGCTTGGCGTCGGAGACCCGGAGATTTCCGATTCTCGTTGGCGCCAAATCGCGTACGGCTCCGTTGCCCCCTTTGCCCTGCTCCAGAGTCGCCGGAGTGCACTTTCGGAAATGATCAAGTCTTCTTCGCCGTATCAGATGGATTGGTGGGAGAATGTGCTTGAGTATAGCAAGGACATAACTTCACTTCTCAGTGGACCAAAGTTGCCACCTGGTCCAATAATTGAAGAACGAACTGATATCGTTAAGAAACGTGAGGAGCCAACATGTTTGAAAGCAGCTTGGGAGTTGTTGGAAATATTTTATGCAGACAAGCAATCTCAAGCATGGTTACCTGAAAAGCTTGTTGATTGGTTAGCTGATTATGACAGCCTCTTTTCAAGCACACATGAAACAGTTTATGGCAAGCTTGCTCGGTTTCAGAAGGAGCTTGTTGACATACAGGTGCTTGAGGATGACCCTAGATATTGGGAAGTGATGTCATCTGCACTCTCAGTTGGTTGGCTTGATATTGTGGTGAAAATGCTGCGGTTGCATGGATCTTATCAACTAGATCAGCTTAGTAATCGTGAGTTAGAGAATGGGCTTGTGGAGGCAGTTGCTGTTCTTATTTCCAAAATGCCCCGCCTATGTCATGAATCTACTAATGGAAAATTAGGTGAACTCTTTAAATCCAAGCCTGACTTCATCAAGGCCTGGGAAAAATGGAGATCTCAAATTACAAAGCTGGATTGTAGTCCATTCTGGATTCAATGTGGTAATCACCATACACGTGAGGGATTGAGAAACTTGCTACAAATTATGCTGGGTAACACTGAAAGTCTCTGCATGGCTACATGTTACTGGATTGAGTTGTATATTTCTCATTTTCTTTACATCAGGCCATTTACAACGGGAATAGAAAGCATGTATAATTTGGCACAAAAATGCATCCAACTGAAACCACCATCAAGTAACCATAAGTTGACTGGACTTATAGTTGGAATTCTTGAAGAAAATACTGAGGTTGTTTTAGCAGAATCTTCTAGAGAATTTGGTCCTTGGATGGTTGCACATGCGATCGAATTGTTGACTGCAGGGAGTGAGCAAGCAGAGATTGTTCTACATGATGAGCGTTATAAATTGGGGGGAATCAGCATGATAGAACTACATCGGCTTGTGTATGCTCAAGTATTATCATCACATGCCTTGACCTGGCAAATAGCTCCAATATATTTGACATCATGCATGAAGCAAGGAATGGGCTTGTTAGAGAATTTGTTGTACAGGCAATCCATTCAACATAATGACTTGTTGCTAAAGAACATTGAGATCTGCCGCTTGTATGAGCTTGATCATATTAGTTCCGATATCATGAAGGTTGCGGGAGTATATCACTGGAAGCATGGTCATAAAGGTGCTGGTGTATATTGGCTTCAACAGTCCAAAGATACTAGTCGTCTTAATCGGATTGCTCAACAATTATTTGATTCTGTTGGAAAGTCAATCTCTGATGAAAGCTTTAAGCAATGGGAAGGTCTAATTGAATTATTGGGTTCTGAATCCAAGCCTGCTGGGGGTCTTGAATTTTTGCACAAGTATAGGGATTTCAAAAGGTCCCTACAGCAGGTATATGGTGGAAAGGCAACGGATGCTGCTCGACAAGCAGTAGGCTCTCTCATACTGCTCATGAAAAATCCATCAACCCCTCAGCGCTTTTGGCTGCCGCTTCTGTATGACTCGTTGAAGCTGTTTAATTGGCACGAGTGTCCTCTTCTAAATGTCTCTGAGACCAATCTTCTGTTGAACAAACTTCAAGAGTTATCTTGGGCGAGATTGCGCCCGCACTTCTCTGAACCTAACCTACCTGCCGAGGCACTGAGCTCTATTAGGCTGGCTCTGGCAACAAATCTTGGTCGTGCTATACTTGATGAATAA 2151 0.4505 MSRVASDTVGNGALVPFSEDTKDSLAVYPLHHGLAPPISRIAISWARGNSLRVSLFVTPSSEPSQTPQDQSGGKVLEVKLGVGDPEISDSRWRQIAYGSVAPFALLQSRRSALSEMIKSSSPYQMDWWENVLEYSKDITSLLSGPKLPPGPIIEERTDIVKKREEPTCLKAAWELLEIFYADKQSQAWLPEKLVDWLADYDSLFSSTHETVYGKLARFQKELVDIQVLEDDPRYWEVMSSALSVGWLDIVVKMLRLHGSYQLDQLSNRELENGLVEAVAVLISKMPRLCHESTNGKLGELFKSKPDFIKAWEKWRSQITKLDCSPFWIQCGNHHTREGLRNLLQIMLGNTESLCMATCYWIELYISHFLYIRPFTTGIESMYNLAQKCIQLKPPSSNHKLTGLIVGILEENTEVVLAESSREFGPWMVAHAIELLTAGSEQAEIVLHDERYKLGGISMIELHRLVYAQVLSSHALTWQIAPIYLTSCMKQGMGLLENLLYRQSIQHNDLLLKNIEICRLYELDHISSDIMKVAGVYHWKHGHKGAGVYWLQQSKDTSRLNRIAQQLFDSVGKSISDESFKQWEGLIELLGSESKPAGGLEFLHKYRDFKRSLQQVYGGKATDAARQAVGSLILLMKNPSTPQRFWLPLLYDSLKLFNWHECPLLNVSETNLLLNKLQELSWARLRPHFSEPNLPAEALSSIRLALATNLGRAILDE* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3617 716 Pfam Nup85 Nucleoporin 86 678 IPR011502 -
Amo16g3617 716 PANTHER FROUNT PROTEIN-RELATED 13 716 IPR011502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3617 Amo-Chr16 146712320 146718170 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3617 K14304 - gmx:100785741 1161.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3617 16 146712320 146718170 Amo16g3617 16 146712320 146718170 ECH