Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3585 ATGGCAACTGCATCTGAGAAGAACAGCATGTATATAGAAACACCGGAAGCTTTTGGAGATGCAGGCAAAAACTTTGATGACGACGGACGAATTAAAAGATCAGGGACATGGATAACGGCGAGCGCGCACATAATAACAGCAGTGATTGGATCTGGAGTTCTGTCGCTTGCATGGGCGATAGCGCAGATGGGTTGGATAGCCGGTCCGGCGGTGCTGTTTGCGTTTTCTTTCATAACATATTTTACTTCCACTCTTCTTGCTGATTGCTATCGCACCCCAGACCCTGTTCATGGCAAACGCAACTACACTTACTCTCATGTTGTCAAAGCTTCCTTAGGAGGAAGGAAATTTCAGTTATGTGGATTGGCTCAATACATAAACCTTGTAGGCGTAACCATTGGCTACACTATAACTGCATCAATTAGTATGGTGGCGGTAAAAAGATCGAATTGCTTTCACAAACATGGACATGAAGACAAGTGCTACATATCAAACAACCCTTTTATGATAATTTTTGCGTGCATCCAAATTGTTCTTAGCCAAATACCAAACTTCCATAAGCTCTCATGGCTCTCCATTGTTGCAGCAGTTATGTCCTTCGCTTATTCTTCAATCGGCCTCGGCCTCTCTATAGCCAAAGTCGCAGGTGGTAGTAATCATGTACGGACATCACTAACAGGGGTGGAAGTTGGGGTGGATGTTACAGCAACAGAGAAGGTTTGGAGGATGTTTCAGGCTATTGGTGACATTGCCTTCGCTTATGCTTTTTCTAATGTGCTTATTGAGATACAGGATACCCTGAAATCAAGCCCTCCGGAGAACAGAGTAATGAAGAGAGCAAGTTTGATTGGCATTTTAACAACAACACTATTCTATGTGCTATGTGGGACCTTAGGTTATGCTGCATTTGGAAATGATGCTCCAGGAAATTTCCTCACAGGCTTCGGTTTCTATGAGCCCTTTTGGCTAATTGACTTTGCCAATATCTGCATAGCTATTCACCTAATTGGGGCATACCAGGTGTTCGTGCAACCCATATTCGGATTCGTAGAGAACTCAAGCAAATCAAGATGGCCAGAAAGCAAAATCATAAACACAGAGCATTCTTTGAACGTTCCCGTTTTGGGAAGCTTAAACGTGAACTTGTTCAGAGTTTTATGGAGAACAACATACGTCATAATCACAGCAGTGGTAGCTATGATATTCCCATTCTTCAATGACTTCTTGGGCCTCATTGGATCACTCTCTTTCTGGCCATTAACCGTTTACTTCCCAATTGAGATGTACATTAAGCAGTCAAAGATGGAGAGGTTTTCCTTCACTTGGGTTTGGCTCAAGATCTTGAGTTGGGTTTGCTTGATTGTTTCTATTATCTCCGCTGCTGGTTCCATCCAAGGCCTTGCTCAAGATCTCAAGAAATATCAGCCATTCAAAGCACAGCAATAA 1446 0.4302 MATASEKNSMYIETPEAFGDAGKNFDDDGRIKRSGTWITASAHIITAVIGSGVLSLAWAIAQMGWIAGPAVLFAFSFITYFTSTLLADCYRTPDPVHGKRNYTYSHVVKASLGGRKFQLCGLAQYINLVGVTIGYTITASISMVAVKRSNCFHKHGHEDKCYISNNPFMIIFACIQIVLSQIPNFHKLSWLSIVAAVMSFAYSSIGLGLSIAKVAGGSNHVRTSLTGVEVGVDVTATEKVWRMFQAIGDIAFAYAFSNVLIEIQDTLKSSPPENRVMKRASLIGILTTTLFYVLCGTLGYAAFGNDAPGNFLTGFGFYEPFWLIDFANICIAIHLIGAYQVFVQPIFGFVENSSKSRWPESKIINTEHSLNVPVLGSLNVNLFRVLWRTTYVIITAVVAMIFPFFNDFLGLIGSLSFWPLTVYFPIEMYIKQSKMERFSFTWVWLKILSWVCLIVSIISAAGSIQGLAQDLKKYQPFKAQQ* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3585 481 Pfam Transmembrane amino acid transporter protein 34 467 IPR013057 -
Amo16g3585 481 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 12 474 - -
Amo16g3585 481 PANTHER OS05G0424000 PROTEIN-RELATED 12 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3585 Amo-Chr16 146240078 146248129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3585 5 479 Organic Solute Cotransporters AT5G49630 74.530 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3585 K24917 - gmx:100806335 864.759