Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3580 ATGTTGGTCTTTCAAGCAAGATCTATACGACATGTAGAAGCCGTTCGACATACGTGTGGATCTAGATGGTCATTTACACTTTATTCTCATTACTCAGATACACCTCACAATAAGTCCAAGCTTGCTCCTTTACAGGAAAGAAAAATGATAGACAGGGTCAAGATATTTGCAAAAGGCGGAGATGGTGGGCATGGTTGCTCCAGCTTTCGCCGTAGCCGACATGATCGCTTGGGCAGACCTGATGGTGGCAATGGTGGCAGAGGCGGAGATGTGATTCTGGAATGCTCTCCTAGAGTTTGGGACTTTAGTGGTTTACAACGTCACCTTATAGCTGAGAAAGGAGGACAAGGAACATCGAAGAATAAGATAGGAACAAGGGGTGCAGATAAGTAG 393 0.4529 MLVFQARSIRHVEAVRHTCGSRWSFTLYSHYSDTPHNKSKLAPLQERKMIDRVKIFAKGGDGGHGCSSFRRSRHDRLGRPDGGNGGRGGDVILECSPRVWDFSGLQRHLIAEKGGQGTSKNKIGTRGADK* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3580 130 MobiDBLite consensus disorder prediction 111 130 - -
Amo16g3580 130 ProSiteProfiles Obg domain profile. 47 130 IPR006169 -
Amo16g3580 130 MobiDBLite consensus disorder prediction 67 81 - -
Amo16g3580 130 Gene3D GTP1/OBG domain 45 130 IPR036726 -
Amo16g3580 130 SUPERFAMILY Obg GTP-binding protein N-terminal domain 49 129 IPR036726 -
Amo16g3580 130 MobiDBLite consensus disorder prediction 60 89 - -
Amo16g3580 130 PANTHER BNAA08G29050D PROTEIN 30 130 - -
Amo16g3580 130 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 30 130 IPR045086 GO:0003924|GO:0005525
Amo16g3580 130 Pfam GTP1/OBG 50 129 IPR006169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3580 Amo-Chr16 146102252 146106068 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3580 - - cam:101492076 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3580 16 146102252 146106068 Amo16g3580 16 146102252 146106068 ECH