Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3563 ATGCGCCCTCCATTCTCCTCCTCCTGCTCCTGTTCCTGCTCCTCTCTCTCTCTCTCTTATTCAATTCCCAATCCCCTCGCTCCCTCACGCGCCGACGCAAAGATGCCGTATTGCGAGGTCGGAGTCCACCAATCCTCCCCCTCCGCGGCCGCATCCTCCGCCGTCGTTCCCGTCGATAGTCCCATCAACAATGAGATAAAGCTATTCTATCAAACCTACGGTCGCGGCACTACTAAAGTTCTCCTCATCATAGGATTGGCTGCCACGCACGAGGCGTGGGGCCCACAGATAGATGCCTTCACCGGAACCACCATCCCTAACGACGACGTTTCGAGCGGAGATGACAATGAATGCGGTGAGGGTATCGAGGTTTGCGCGTTTGATAATCGGGGCGTGGGAAGGAGCTCCGTGCCAGTCCAAAAATCCGAATACTCAACCACGATCATGGCGAAGGATGCAATTGCATTGTTAGATCATCTAGGTTGGAAGAAAGCCCATGTTTTTGGGCACTCAATGGGAGCTATGATAGCTTGTAAAGTAGCAGCATTGGTTCCTGATAGAGTTCTCTCCTTGGCATTGCTCAATGCAACAGGGGGAGGTTTTCAATGTTTTCCAAAGCTTGACCGACGAACATTCTCTGTCGCTTTCCGTTTCTTGAAAGCAAAGACTCCTGAGCAAMGGGCTGCTGTTGACTTGGACACCCATTACTCACAGGAATATCTTGATGAATATGTTGGAACCGAAAAGAGGAGAGCAATATTATATCAGCAATATGTCAAATGTATATCATCATCTGGAATGCAATCTAGCAGTGGTTTTGATGGCCAAATGCATGCATGTTGGACACATAGTGTGACTCAACCAGATATTGATGCAATGAAATCTGGAGGTTTTCTTGTTTCAGTCATTCATGGAAGGCATGACATAATTGCTCAGATTGATCATGCAAAGAGACTTGCTGAGAGGCTTCACCCGATAGCCAGAATGGTTGATCTTCATGGAGGTCATTTAGTGAGTCATGAGCGGCCTGAAGAGGTTAATCAAGCACTGTTTGACTTGATCAAGGCAGCAGGAGAGAATAAGAGCCCACATGATTGGACTAATTTGTCGACGAACCAATCTTGGTTGAAAGAGAACAGAATGTTATTTCTCAGAACAATTCAGGGTGGAAGCCGTGTCTCCTTTAAATTTTCCCTAATAGAAAAACTCTATCTTTGCCTACTATACTTGTTTGGTATCCTCGTTTTAGCATTCGAGAACGGAAGAAAGCTTCTAAGAAGCTTAAAACCAGTTCGAGTTGGATGTTCCCCTTCATATGTTAATGTTGATAGTTCATAA 1338 0.4619 MRPPFSSSCSCSCSSLSLSYSIPNPLAPSRADAKMPYCEVGVHQSSPSAAASSAVVPVDSPINNEIKLFYQTYGRGTTKVLLIIGLAATHEAWGPQIDAFTGTTIPNDDVSSGDDNECGEGIEVCAFDNRGVGRSSVPVQKSEYSTTIMAKDAIALLDHLGWKKAHVFGHSMGAMIACKVAALVPDRVLSLALLNATGGGFQCFPKLDRRTFSVAFRFLKAKTPEQRAAVDLDTHYSQEYLDEYVGTEKRRAILYQQYVKCISSSGMQSSSGFDGQMHACWTHSVTQPDIDAMKSGGFLVSVIHGRHDIIAQIDHAKRLAERLHPIARMVDLHGGHLVSHERPEEVNQALFDLIKAAGENKSPHDWTNLSTNQSWLKENRMLFLRTIQGGSRVSFKFSLIEKLYLCLLYLFGILVLAFENGRKLLRSLKPVRVGCSPSYVNVDSS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3563 445 Pfam alpha/beta hydrolase fold 108 342 IPR000073 -
Amo16g3563 445 SUPERFAMILY alpha/beta-Hydrolases 64 354 IPR029058 -
Amo16g3563 445 PRINTS Epoxide hydrolase signature 121 136 IPR000639 GO:0003824
Amo16g3563 445 PRINTS Epoxide hydrolase signature 167 180 IPR000639 GO:0003824
Amo16g3563 445 PRINTS Epoxide hydrolase signature 181 194 IPR000639 GO:0003824
Amo16g3563 445 PRINTS Epoxide hydrolase signature 331 353 IPR000639 GO:0003824
Amo16g3563 445 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 37 434 - -
Amo16g3563 445 PANTHER EPOXIDE HYDROLASE 37 434 - -
Amo16g3563 445 Gene3D alpha/beta hydrolase 62 357 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3563 Amo-Chr16 145731092 145737306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3563 80 216 Acyl Lipid Metabolism Gene Families AT3G51000 33.333 4.69e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3563 - - aip:107605226 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3563 16 145731092 145737306 Amo16g3563 16 145731092 145737306 ECH