Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3527 ATGGTGAATGCTGCGCATTTCTTCTTCGGTGTAATAGGAAATGCTTCTGGACTCTTCCTATTCTTGGCTCCAACTATTACATTCAAGAGGATTATTAAAAAAAAATCCACAGAACAATTCTCTGGAGTTCCTTACCCTATGACACTGCTCAACTGTCTTCTTTCCACTTGGTATGGATTGCCATTTGTGTCTCCAAACAACATACTTGTGGTGATAATAAACGGCACAGGAGCATTGATAGAAATCGTATACGTAATAATCTTCATAACGTATGCACCGCCGAAGGAGAGGAACAAAACCCTTGGGCTCTTCTCATTTGTAATAGCAATTTTCGCCATCGTTGTTGTTATTTCCCTTATTGCCCTTCATGGCAATATCAGAATGGTCTTCTGCGGTTTGGCTGCCGCCCTCTTCTCCATTATTATGTATGGCTCTCCCCTCTCTATTATGAAACTGGTGATCAAAACTAAGAGCGTGGAGTTCATGCCGTTCTACCTTTCCCTCTTTGTGTTCATCTGTGGTACTTCCTGGTTCATTTATGGCCTTATAGGCCGTGACCCCTACCTTGCAGTACCAAATGGAATAGGATCAGCATTGGGGACAGCGCAACTAATATTGTATTTCATGTACCGAGGCAACAAAGGTGTTAGCAATGAGGAAACAAAGGCAGCAGCAACAGAAGCAGCAGACACCATGGAGATGGGCGTTGCAAAAGCCACATCATCGGAACAATAA 735 0.4313 MVNAAHFFFGVIGNASGLFLFLAPTITFKRIIKKKSTEQFSGVPYPMTLLNCLLSTWYGLPFVSPNNILVVIINGTGALIEIVYVIIFITYAPPKERNKTLGLFSFVIAIFAIVVVISLIALHGNIRMVFCGLAAALFSIIMYGSPLSIMKLVIKTKSVEFMPFYLSLFVFICGTSWFIYGLIGRDPYLAVPNGIGSALGTAQLILYFMYRGNKGVSNEETKAAATEAADTMEMGVAKATSSEQ* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3527 244 PANTHER RAG1-ACTIVATING PROTEIN 1 4 238 - -
Amo16g3527 244 Gene3D - 127 223 - -
Amo16g3527 244 Gene3D - 8 95 - -
Amo16g3527 244 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 238 IPR018180 GO:0051119
Amo16g3527 244 Pfam Sugar efflux transporter for intercellular exchange 8 95 IPR004316 GO:0016021
Amo16g3527 244 Pfam Sugar efflux transporter for intercellular exchange 131 214 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3527 Amo-Chr16 145099472 145103054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3527 2 191 Miscellaneous Gene Families AT1G21460 74.211 5.91e-102 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3527 K15382 - gmx:100799083 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3527 16 145099472 145103054 Amo16g3527 16 145099472 145103054 ECH