Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3470 ATGTGGAAGTCTTTAGTTGGAGATGATGAAGAGCAAGGGGAGAGCTTGTTGGGTGAGGCTTCAGGTGGCCTCTGCTCCCTCTCTCCAACACAGAGAATTTACGGATTTGCAGCTTGTTTGATTGCTGGTCTTGCTTGCATGTTACTGTCAATGATTGTTTTTGCCAAACCCATCAAATTTGCATTATTATTCACCTTTGGAAACGTATTAGCAGTGGGAAGCACAGCCTTTCTTCTTGGACCTGCACAACAACTCGGAATGATGTTTGATACTGCTCGTGTTTTTGCAACAGCCATATACATCGGATGTGTGGTTATAGCACTCATATGTGCGCTCTTGATTCATGACAAGTTGTTGACTATAATTGCTATCATAATTGAGATTGGTGCTCTTATTTGGTACAGCTTAAGCTACATACCTTTTGCTCGTAGAATGGTTTCTGAGTTGATGATTCGATTATGCGACACAGAACTTTGA 477 0.4172 MWKSLVGDDEEQGESLLGEASGGLCSLSPTQRIYGFAACLIAGLACMLLSMIVFAKPIKFALLFTFGNVLAVGSTAFLLGPAQQLGMMFDTARVFATAIYIGCVVIALICALLIHDKLLTIIAIIIEIGALIWYSLSYIPFARRMVSELMIRLCDTEL* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3470 158 Pfam Got1/Sft2-like family 33 140 IPR007305 GO:0016192
Amo16g3470 158 PANTHER VESICLE TRANSPORT PROTEIN 4 158 - -
Amo16g3470 158 PANTHER UNCHARACTERIZED 4 158 IPR011691 GO:0016021|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3470 Amo-Chr16 143908069 143912527 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3470 - - gmx:100527819 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3470 16 143908069 143912527 Amo16g3470 16 143908069 143912527 ECH