Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3461 ATGTCCAGCACCAGTAACACCAAATCGAAATCAATGCCACCTCATCACTACCACCACCACCATCAAGTCCCCTGCACCCGCACACACCAGATCGCTGCCCTACTCCTCGTGGTTGGCACCTTCTTCTTCACCAGACTCTTCGATCGCTCCTTTGCCCCATGCACCACCACTACCCTCCTTCGCACGTCGCAGAATCAGTTCTTTGGGCCCCATGCGTGGCCGGAGCAAGGTTACGGTTCCCAGCTGTCCCTCAAGATCTACGTTTACGACGCCGCCGAGATCGACGGCTTGAATCAGCTCATGTACGGTAGGGACGGCAAGATCACCGAGGAAGCTTGCTTGAAGGGGCAGTGGGGCACTCAGGTCAAAATACACAAGTTACTTCTGACATCAAGATATCGGACGCGAAAGAAAGAGGATGCAGATTTGTTTTTTGTCCCGTCATATGTTAAATGTGCACGGATGATGGGTGGTCTAAATGACAAAGAAATTAATCAGACCTATGTCAAGGTCATAAGCCAAATGCCATATTTTCGGTTATCTGGAGGCCGCAACCACATCTTTGTTTTTCCCAGTGGAGCAGGGGCTCACTTGTTCAAATCATGGGCAACATTTATAAATCGCTCCATTATTCTTACACCAGAGGGGGATCGGACTGATAAGAGAGATACAAGTGCCTTTAATACATGGAAAGATATAATCATTCCAGGTAATGTGGATGATGGTATGACAAAAGATGGGACTACTGTGGTCCGGCCTTTACCTATTTCAAAGCGGAAATACTTGGCCAATTATTTAGGACGTGCTCAAGGAAAAGCCGGCCGTCTTCAGCTAATAGAGCTAGCAAGACAATTTCCTAAAAAGTTGGAATGTCCAGATTTGAAATTCAGCGGACCTGACAAGTTGGGAAGGAAAGAATATTTTGAACATTTGCGCAATGCAAAGTTTTGCCTTGCTCCACGTGGGGAGTCATCTTGGACCCTCCGCTTTTATGAGTCATTTTTTGTGGAATGTGTTCCAGTTATATTATCTGATCAAACAGAGTTGCCATTCCAGAACGTTGTCGATTACAGCCAGGTATCAATAAAATGGCCATCCAGTCGAATAGGTCCTCAATTATTGCAGTATTTGGAGTCTATACCAGACAAAGAAATAGAAGCAATACTAGCCCGCAGTCGACAAATTAGGTGCTTATTTGTCTATGCTGCGGATTCAGAACCTTGTTCAGCAATGCGAGGAATTATGTGGGAACTCCAAAGGAAAGTGAGGCGGTTTCACCACTCGGCGGAAACATTCTGGTTGCACAATGGATCTATTGTAAACAGGAACTTAGTTGAATTTCCAAAGTGGGAACTCCCTATGCCTTTACCTTGA 1374 0.4585 MSSTSNTKSKSMPPHHYHHHHQVPCTRTHQIAALLLVVGTFFFTRLFDRSFAPCTTTTLLRTSQNQFFGPHAWPEQGYGSQLSLKIYVYDAAEIDGLNQLMYGRDGKITEEACLKGQWGTQVKIHKLLLTSRYRTRKKEDADLFFVPSYVKCARMMGGLNDKEINQTYVKVISQMPYFRLSGGRNHIFVFPSGAGAHLFKSWATFINRSIILTPEGDRTDKRDTSAFNTWKDIIIPGNVDDGMTKDGTTVVRPLPISKRKYLANYLGRAQGKAGRLQLIELARQFPKKLECPDLKFSGPDKLGRKEYFEHLRNAKFCLAPRGESSWTLRFYESFFVECVPVILSDQTELPFQNVVDYSQVSIKWPSSRIGPQLLQYLESIPDKEIEAILARSRQIRCLFVYAADSEPCSAMRGIMWELQRKVRRFHHSAETFWLHNGSIVNRNLVEFPKWELPMPLP* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3461 457 Pfam Exostosin family 83 369 IPR040911 -
Amo16g3461 457 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 16 442 IPR004263 GO:0006486|GO:0016757
Amo16g3461 457 PANTHER EXOSTOSIN FAMILY PROTEIN 16 442 - -
Amo16g3461 457 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3461 Amo-Chr16 143598365 143607556 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3461 - - adu:107495021 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3461 16 143598365 143607556 Amo16g3461 16 143598365 143607556 ECH