Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3343 ATGATAGCGATTCCGTACCTGACCGCTCTAACCACATACTTCAGCTATGGCCTTCTCTTCGCTTTCGGTCAATTCAGAGATTTCTTCCGCAAACTCATTGATTGGTCCAAAGCTAACACCCTTCAAGGTTACGCTCCGATCTGCTTAGGCCTCGAGGATTTCTATATCCGCCGTTTGTACCTCCGTATTCAGGACTGCTTCGGAAGACCAATATCAAGTGCCCCTGATGCTTGGTTTGATGTAGTTGAACGCTACTCGAATGACAATAACAAGACACTGAAACGGACTACAAAAGTAAGTAGATGTCTCAACTTGGGATCATACAATTATCTTGGTTTTGCTGCCGCAGATGAATACTGCACTCCTCGAGTTATTGAGACATTGAAGAAGTATTCACCGAGCACTTGTAGCAGCCGTGTAGATGGAGGCACAACTGTACTTCACAATGAATTGGAGAAATATGTGGCAAGTTTTGTTCGAAAGCCAGCTGCTATAGTTTTTGGTATGGGCTATGTGACAAACTCTGCTATTCTTCCAGTGCTGATGGGAAAGGGATGTTTGATTATCAGTGATTCGTTGAACCACAATTCAATTGTTAATGGTGCACGAGGGTCCGGAGCAACCATTCGTGTTTTTCAACACAACATTCCATCACATCTTGAGGAAGTACTTAGAGAACAAATTGCTGATGGACAGCCAAGGACTCACAGGCCTTGGAAGAAGATAATTGTCATTGTGGAGGGAATATACAGTATGGAAGGAGAGCTCTGCAAGCTTCCAGAGATCATAGCTGTATGCAAAAAATATAAGGCCTACACATACTTGGATGAAGCACACAGCATTGGAGCAGTGGGCAAAACAGGAAGAGGGGTTTGCGAGCTCTTAGGTGTGGATACTGCTGATATTGACATCATGATGGGGACCTTTACCAAATCATTTGGATCATGTGGAGGTTACATTGCAGGATCTGAGGACCTTATAAAATACTTGAAGTACACTTGCCCTGCTCATCTTTATGCAACTTCTGTTTCACCACCAGCTGCACAACAAATAATATCGTCCATAAGAGTTATCCTTGGAGAGGATGGTTCCAATAGAGGTGCCCAGAAACTTGCAAAAATTAGAGAAAATAGCAACTTTTTCAGGTCAGAACTGCAGAAGATGGGCTTTGAAGTTCTCGGAGATAATGATTCTCCTGTGATGCCAATAATGCTTTACAATCCTGCGAAAATCCCTGCCTTCTCTAGAGAGTGTCTCAAGCACAATGTTGCTGTTGTGACAGTGGCGTTTCCAGCAACACCACTGTTACTTGCCAGAGCACGCATATGCATATCTGCTTCTCATTCAAGGGAAGACCTTGTGAAAGCCTTGCAGGTTATCAGCAAAGTTGGTGATCTAGTTGGCATAAAATATTTCCCTGCTGAACCACTGAAGCAGCATCAAGATGGAAAAGCTGTCAAATTTGACTAA 1470 0.434 MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKLIDWSKANTLQGYAPICLGLEDFYIRRLYLRIQDCFGRPISSAPDAWFDVVERYSNDNNKTLKRTTKVSRCLNLGSYNYLGFAAADEYCTPRVIETLKKYSPSTCSSRVDGGTTVLHNELEKYVASFVRKPAAIVFGMGYVTNSAILPVLMGKGCLIISDSLNHNSIVNGARGSGATIRVFQHNIPSHLEEVLREQIADGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTADIDIMMGTFTKSFGSCGGYIAGSEDLIKYLKYTCPAHLYATSVSPPAAQQIISSIRVILGEDGSNRGAQKLAKIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKHNVAVVTVAFPATPLLLARARICISASHSREDLVKALQVISKVGDLVGIKYFPAEPLKQHQDGKAVKFD* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3343 489 Pfam Aminotransferase class I and II 102 460 IPR004839 GO:0009058|GO:0030170
Amo16g3343 489 CDD KBL_like 100 464 - -
Amo16g3343 489 ProSitePatterns Aminotransferases class-II pyridoxal-phosphate attachment site. 308 317 IPR001917 GO:0016740
Amo16g3343 489 Gene3D Aspartate Aminotransferase, domain 1 98 460 IPR015422 GO:0003824
Amo16g3343 489 SUPERFAMILY PLP-dependent transferases 98 465 IPR015424 -
Amo16g3343 489 PANTHER LONG CHAIN BASE BIOSYNTHESIS 2A-LIKE PROTEIN 1 483 - -
Amo16g3343 489 Gene3D - 117 367 IPR015421 GO:0003824
Amo16g3343 489 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 1 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3343 Amo-Chr16 140865322 140870771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3343 1 489 Acyl Lipid Metabolism Gene Families AT5G23670 83.231 0.0 869
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3343 K00654 - gmx:100803194 915.605