Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3330 ATGGCGGATCCAATGATGAAGGCACTCACCGCTATAGCTCTGATAGCATCGCTGTTGGTGTGTTCCTCACTTGCTTCCTCCGACGTCCCTTTCATCGTCGCGCACAAGAAGGCCACGCTCAACAGGATCAATTCCGGTGCTGAGAGGGTTTCCGTCACCATCGATATCTATAACCAAGGAACCTCGACTGCATATGATGTAAGTCTAACAGATGATGGCTGGCCAAGTGATAAATTTAGTGTAATCAGTGGTAGCACCACAAAGTCATGGGAGAAGCTTGATGCTGGTGGCATCCTCTCCCACACTTTTGAGCTTGAGACAAATACAAAGGGAGTATTTGCTGGCGAACCAGCTGTCATAAAATTCCGTGTTCCCACAAAGGCCGCTTTACAGGAGGCATTATCAACTCCCATATTGCCCTTGGATGTTCTTGCTGATAGACCTCCTGAGCAGAAGTTTGAATGGGCTAAGAGGTTGCTGGCTAAGTATGGATCTCTTATCTCGGTGATATCCATCATTGTTCTGTTTGTGTATCTGGTTGCTACACCATCAAAGTCCAGCACAAAAGGAAGCAAGAAGAGGCGTTAA 588 0.4711 MADPMMKALTAIALIASLLVCSSLASSDVPFIVAHKKATLNRINSGAERVSVTIDIYNQGTSTAYDVSLTDDGWPSDKFSVISGSTTKSWEKLDAGGILSHTFELETNTKGVFAGEPAVIKFRVPTKAALQEALSTPILPLDVLADRPPEQKFEWAKRLLAKYGSLISVISIIVLFVYLVATPSKSSTKGSKKRR* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3330 195 Pfam Translocon-associated protein beta (TRAPB) 17 189 - -
Amo16g3330 195 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 7 189 - -
Amo16g3330 195 PANTHER BNAA02G28300D PROTEIN 7 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3330 Amo-Chr16 140366329 140369365 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3330 K13250 - gmx:100500066 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3330 16 140366329 140369365 Amo16g3330 16 140366329 140369365 ECH