Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3292 ATGTACGTGGCGCCTCCACCTCAGCGCTCCGATCTGGCTTCAGGATCCGGTGATTTGCGGGTTTACCAAGCTTGGAAGGGCAGTAATGGTAGTTCATATTTGGACCAGTATGTGAGATTGATTGCACTGACAATTCTCCTCATTGTGTGCTCCTGTTGCAGTTTCTGTGCCTTTGTTGCCAGAAAACTGATGGATGATTTTAATGATCACTGGGGGATAAGCATAACAGCTGTTGCTGCTGTATTCACAGACTTAGTTCTTCTTTTGTTAACATCTGGCCGAGATCCTGGCATAATCCCACGCAATGCACATCCTCCAGAGCCAGAAGGTTTCGATAATAATGTAGATGTTGGTGCTGGTCAGACTCCTCAACTGCGGTTGCCTCGCTTCAAGGAGGTTGATGTCAATGGAGCAACTGTTAAAGTCAAGTATTGTGATACTTGTATGCTCTACAGGCCTCCTCGATGCTCTCACTGCTCAATCTGTAATAACTGTGTTGAACGGTTTGATCATCACTGCCCCTGGGTTGGACAATGTATTGGACTGCGTAATTATAGGTTCTTCTTCATGTTTGTCTTCTCAACTACGCTACTTTGTATATATGTTTTCGCATTTTGCTGGGTCTATATTAGAAGAATTATGGTATCAGAGGAGATAACAATTTGGAAGGCCATGATCAAAACTCCAGCTTCCATAGTGCTGATAGTTTACACCTTCATATCTATGTGGTTTGTTGGAGGGCTTACTGCCTTCCATTTATATCTGATTAGTACAAATCAGACTACGTACGAGAATTTCAGATATCGATATGATGCACGAGCAAACCCATATAATAAAGGTTTTTTGAATAATTTCAAAGAGATATTCTGCACCAGCATTCCTCCATCKAAGAACGACTTCAGGGCATTGGTGCCAAACGAACCAGCATTACCTACCCGATCGGTGGGCGGAGGCTTTATGAACCAAAATATGGGAAAAGCTGGGGAGGACATAGAAATGGGGAGGAAAACGGTCTGGGGTGACATGGGTGCCGGAATTGACCATTCTGAAGGTCCATTAAACAATGAGAGAACAACTGTAAAGGAAGGTGAACTAGGTGATTTGTCTCCTGAAATCAGGACGACAGTTGATGAGACAGCCGACCGTGCTGGACTCCATCCTAGGCGATCAAGCTGGGGTAGAAAAAGCGGAAGCTGGGAAATGTCCCCAGAAGTTCTTGCTTTGGCAGCAAGGGTAGGGGAACCGAATCGTGTGGGTGGCGGTAGCAGTAGTAGCTTGACAAATGAGAATCGTCATACATAG 1302 0.4485 MYVAPPPQRSDLASGSGDLRVYQAWKGSNGSSYLDQYVRLIALTILLIVCSCCSFCAFVARKLMDDFNDHWGISITAVAAVFTDLVLLLLTSGRDPGIIPRNAHPPEPEGFDNNVDVGAGQTPQLRLPRFKEVDVNGATVKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVFAFCWVYIRRIMVSEEITIWKAMIKTPASIVLIVYTFISMWFVGGLTAFHLYLISTNQTTYENFRYRYDARANPYNKGFLNNFKEIFCTSIPPSKNDFRALVPNEPALPTRSVGGGFMNQNMGKAGEDIEMGRKTVWGDMGAGIDHSEGPLNNERTTVKEGELGDLSPEIRTTVDETADRAGLHPRRSSWGRKSGSWEMSPEVLALAARVGEPNRVGGGSSSSLTNENRHT* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3292 433 Pfam DHHC palmitoyltransferase 142 267 IPR001594 GO:0016409
Amo16g3292 433 PANTHER S-ACYLTRANSFERASE 36 430 - -
Amo16g3292 433 MobiDBLite consensus disorder prediction 418 433 - -
Amo16g3292 433 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 36 430 - -
Amo16g3292 433 ProSiteProfiles DHHC domain profile. 143 193 - -
Amo16g3292 433 MobiDBLite consensus disorder prediction 411 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3292 Amo-Chr16 139381858 139385912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3292 78 289 Lipid Metabolism Gene Families AT4G22750 29.412 9.20e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3292 - - gmx:100810894 742.265