Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3220 ATGGTTTGTGTTTACAGCCTCTCTCATTTTGACGCAACAATTCCTCCCTCTTCATTCCTCGGTTCCTCCGTGTCGTTTCCAACCACTCATGTCGTTTCCAACCACAAGTTCTCGATACTATCAATGACTATTAAGCGAAGCCCTAAGCGTCTCAAATACACCGCTCCTCGTTTCACCAAGGAGGATGGGTTGGTGTACATTGAAGCTGATCCATCAGGCTCCGACACGTGGAAATTGGAACCAGTTGTTAATCTCTTGAAAGAAGGTGCTGTTGGTGTTATCCCTACCGATACCCTATATGCTATAGCATGTGACTTGAGATGCCAATCAGCTATTGAACGACTTCGTAGAATCAAGAATATAGAACCTTCTAAGCCTCTTAGCATCTTATGCCACTCGTTTCGGGACATAGACAAATTTACGACTGGATTTCCTCGTGGTGATGGTCAAGGCCATGCAAATTTATTCAAAGTAGTTAAGCATTACTTGCCTGGTCCATACACTTTCATCTTAATGGCAAGCAAAGAATTACCTAAGCAGTGTATAAGGGTTGGGACTTCATCTGCTAAATATGCATCAAGGAAAAATGTGGGTGTTCGTATGCCTGATGATGCCATTTGTCAAGCAATACTTAAGGAGATGGATTCACCATTAATATGTACAAGCATCAAGTCTCTGAAGGAAGATGAGTGGATGATTGATCCAGTTATGATAGCTGATACATATGGACCAGAGGGTCTTGATTTCGTCGTTGATGGTGGTGTACGAGTGGCTGATCCATCCACAGTGGTTGACATGACAAAAATTCCTCCCAGAGTCCTTCGCGAAGGAAAGGGTCCTATTCTACCATGGATGGTTTTGGAAGATGATCAGAAAGCTGATGTTGATAAAGATCTCATACCGGCTGCAATTTGA 915 0.4306 MVCVYSLSHFDATIPPSSFLGSSVSFPTTHVVSNHKFSILSMTIKRSPKRLKYTAPRFTKEDGLVYIEADPSGSDTWKLEPVVNLLKEGAVGVIPTDTLYAIACDLRCQSAIERLRRIKNIEPSKPLSILCHSFRDIDKFTTGFPRGDGQGHANLFKVVKHYLPGPYTFILMASKELPKQCIRVGTSSAKYASRKNVGVRMPDDAICQAILKEMDSPLICTSIKSLKEDEWMIDPVMIADTYGPEGLDFVVDGGVRVADPSTVVDMTKIPPRVLREGKGPILPWMVLEDDQKADVDKDLIPAAI* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3220 304 Pfam Telomere recombination 85 277 IPR006070 GO:0003725
Amo16g3220 304 TIGRFAM TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 78 279 IPR006070 GO:0003725
Amo16g3220 304 Gene3D DHBP synthase 65 285 - -
Amo16g3220 304 SUPERFAMILY YrdC/RibB 67 280 IPR017945 -
Amo16g3220 304 ProSiteProfiles YrdC-like domain profile. 76 279 IPR006070 GO:0003725
Amo16g3220 304 PANTHER DHBP SYNTHASE RIBB-LIKE ALPHA/BETA DOMAIN-CONTAINING PROTEIN 26 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3220 Amo-Chr16 136964734 136968599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3220 - - adu:107494786 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3220 16 136964734 136968599 Amo16g3220 16 136964734 136968599 ECH