Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3219 ATGGAGGGCATGCATAGCTTCTGGCAATTGGGTGATGAACTTCGTGGTCACTCAAAGTCATCTGAGGATCACAAATGGTTGATGGTTGCTTCTAAATTGGCTGAGCAGACAAGATCAAAGGGAGAACGAGTGAATAACTTAGATCTCTCAAAGGGCCCTATTGAACCAAAGCCAAGAGATAAATTTGGGTTCCAGGAGGAGAACAAGTTTGACACACTTAACTTAAGCATGCTAAATCTGGACTCGAAAGTTACTGAAAATGTGAGCAAAAGCTCACTACGGAACAGTGCTTACAATATTAATGCTGTGTACCACAAAAGCAATGCAAATTTGGTGGGAAACTTGAACAGCAACAAGTATAGTGCTAATATTCCGCACAACAAAGAGTCCAACAATAACAGCAATATCAATAACAACAATGAAAACAATTCAAATGCAGCTGACAAAAGGTTTAAGACCCTGCCTGCAGCAGAGACACTCCCACGTAATGAAGTGCTTGGTGGATACATCTTTGTCTGTAATAATGACACAATGCAGGAAGACCTCAAACGTCAGCTATTTGGTTTGCCTCCAAGATATCGAGATTCTGTTCGGGCCATAACACCAGGATTACCTCTATTTCTGTATAACTATACTACTCACCAACTGCATGGCATTTTTGAGAACAAGAGTGCACTACCAGCAGATTTTATTTTGGTTTTTGTGCCATTTATAGAATTAGAGAGGTACACTGTTTGGGGGGTTTATGCAGCAAGTTTTGGTGGCTCTAACATAGATCCAACTGCATGGGAGGACAAAAAGTGCAAAGGCGAGTCAAGGTTCCCAGCTCAGGTGAGAATCCGTGTCAGGAAAGTCTGCAAGGCATTGGAGGAAGATGCATTCAGGCCAGTGTTGCATCACTATGATGGTCCAAAGTTTCGTCTTGAGCTGTCAGTTCCAGAGACTCTGGATTTGATGGATCTATGTGAACAAGCTGGTTCGGCTGCATAA 990 0.4242 MEGMHSFWQLGDELRGHSKSSEDHKWLMVASKLAEQTRSKGERVNNLDLSKGPIEPKPRDKFGFQEENKFDTLNLSMLNLDSKVTENVSKSSLRNSAYNINAVYHKSNANLVGNLNSNKYSANIPHNKESNNNSNINNNNENNSNAADKRFKTLPAAETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFENKSALPADFILVFVPFIELERYTVWGVYAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSAA* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3219 329 MobiDBLite consensus disorder prediction 124 146 - -
Amo16g3219 329 SMART dcd 164 324 IPR013989 -
Amo16g3219 329 PANTHER - 4 222 IPR044832 GO:0034976
Amo16g3219 329 PANTHER - 246 328 IPR044832 GO:0034976
Amo16g3219 329 MobiDBLite consensus disorder prediction 35 61 - -
Amo16g3219 329 ProSiteProfiles DCD domain profile. 164 324 IPR013989 -
Amo16g3219 329 PANTHER BNAC07G48970D PROTEIN 4 222 - -
Amo16g3219 329 PANTHER BNAC07G48970D PROTEIN 246 328 - -
Amo16g3219 329 Pfam Development and cell death domain 167 224 IPR013989 -
Amo16g3219 329 Pfam Development and cell death domain 240 321 IPR013989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3219 Amo-Chr16 136931360 136934001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3219 - - adu:107494788 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3219 16 136931360 136934001 Amo16g3219 16 136931360 136934001 ECH
Amo16g3219 16 136931360 136934001 Amo06g2669 06 90606195 90609557 hybridization