Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3200 ATGACCCTCCGTCTTCTCTCAGCTCCACCTTCCTTCCCTCTCTTCACCTGCCATGCTTCCTCCACCACCGCCGCCGCTGCCCGTCCCCTCTCTTTGCCTCCGCCTCCGCCTCCGCTTCCTCAACTCTCGTCGTCACCCCCTACTTCTTCCACTCCTCAGTCCCCGCTAACTTGCGCACTTCACTGCCCTCACTTCCAGTCGTGCTCTGGGTGCACACACGAGTTCAATCTCCACCGTCCGGATATACTGGAAGATGCTACCGATTTCTTTCGGAAACATGGCGTCTCCGATTTCACTTTCGATACCTGCAAATTGTGGGGTTGGAGGTGCCGTGCGAAATTGGCTGTGCGTGGCTCTTCATCGGACCCTCTCATTGGTCTCTATGAAGAGGGTACTCATAACGTAGTTGACATTCCACAGTGCAAAGCTCATCATCCTAATATTAATGCTGCTGTTGAGCTGCTTAGACAGGGTATTGCTGAATTGGATATTGAACCATATGTTGAAGATGAGGGTACTGGCGAGTTGCGATATGTTCAGATGGCTGTAACAACACACAACACGTCTCTTCCAGCAGCAGAAAGATATATGAATGGAAAGGTTCAGGTTACTTTAGTTTGGAATTCAAGAAATGAAAATTCACCTAGTTCAGATAAATTGAATGAATTGGCAAATTTTCTATGGAAAAACGGTGGGCCCAAGAGCAAGCTTCATTTACTCCATTCTGTGTGGGTCAACTTTCAGACTTCGACAAACAATATAATTTTTGGGAATAGATGGAGACATCTTCTTGGAGAYAGAGATTTTTGGGAACATGTTGGTGGAATTGATGTGTCCTTGGCTCCTTCTAGTTTTGGCCAGGCAAACACTAGGGCTTTTGATGTCTTGCTTCGGAAGTTACAGAAATATGTTCCACATAGGGCATCTGTTGCAGATTTGTATGCTGGAGCTGGGGTAATTGGGTTGTCATTAGCTGCCACTAGAAAGTGCAGGTCCGTTAAATGCATCGAGATTAACAAAGAGTCAAAGGCATCTTTTGAGAAGACTATTGGTCGGTTGCCTGCCACAGTTGACAGCAGTATCACGTGGCATCATGCCGATGCTTCCAGAGAACCTTTTTTATGGCTTGTGGGTTCAGATGTTGTTGTTGTTGATCCTCCCAGAAAAGGACTAGATGTATCACTAAAAGATGCATTGCAGAATATATCATCAATGGAGCGAAAAYTCTTTTCATCATTTGAGAGCTCAAACTCAGTCAAGGAAGAGAAACGACCGTGGGTTTTACGTGCTAAAGAAGATTCAGTCCAGGTTGGAAGAAAACCGCCTCCTGAGAACATTCCTCAATCAGTGCCCCAAACCCTGATWTACATAAGTTGTGGATGGGAAAGCTTTAAGGAGGACTGTAAGTCATTGTTGTCCAGTAAGGCTTGGCATTTGGATAAAGCTCATGGGTTTAATTTCTTTCCTGGTACCCAAAGGATACATTGTTTGGTGATTCGCCCCTTCCCCTTCCCCCTTCCCCTCTCCCCCCCCCCCCAAAAAAAAAAGAAAAATGAAAAAAAAAAATTGATTTGTCATTTTTCATTTTCATTAGAATATTGA 1602 0.4507 MTLRLLSAPPSFPLFTCHASSTTAAAARPLSLPPPPPPLPQLSSSPPTSSTPQSPLTCALHCPHFQSCSGCTHEFNLHRPDILEDATDFFRKHGVSDFTFDTCKLWGWRCRAKLAVRGSSSDPLIGLYEEGTHNVVDIPQCKAHHPNINAAVELLRQGIAELDIEPYVEDEGTGELRYVQMAVTTHNTSLPAAERYMNGKVQVTLVWNSRNENSPSSDKLNELANFLWKNGGPKSKLHLLHSVWVNFQTSTNNIIFGNRWRHLLGDRDFWEHVGGIDVSLAPSSFGQANTRAFDVLLRKLQKYVPHRASVADLYAGAGVIGLSLAATRKCRSVKCIEINKESKASFEKTIGRLPATVDSSITWHHADASREPFLWLVGSDVVVVDPPRKGLDVSLKDALQNISSMERKXFSSFESSNSVKEEKRPWVLRAKEDSVQVGRKPPPENIPQSVPQTLIYISCGWESFKEDCKSLLSSKAWHLDKAHGFNFFPGTQRIHCLVIRPFPFPLPLSPPPQKKKKNEKKKLICHFSFSLEY* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3200 533 MobiDBLite consensus disorder prediction 26 52 - -
Amo16g3200 533 Gene3D Vaccinia Virus protein VP39 103 402 IPR029063 -
Amo16g3200 533 PANTHER BNAA06G32370D PROTEIN 7 499 - -
Amo16g3200 533 Pfam Methyltransferase small domain 294 387 IPR007848 GO:0008168
Amo16g3200 533 MobiDBLite consensus disorder prediction 29 45 - -
Amo16g3200 533 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 66 503 IPR010280 GO:0006396|GO:0008173
Amo16g3200 533 Gene3D - 109 286 - -
Amo16g3200 533 CDD AdoMet_MTases 310 402 - -
Amo16g3200 533 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 60 470 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3200 - - gmx:100816889 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3200 16 136497353 136504170 Amo16g3200 16 136497353 136504170 ECH