Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3170 ATGTCATACTCAAGGTTCCTCAGCTCAAGTAAAGGCCCTTTGTGGGTTGCAGCTTACTGTTTCAAGCACCTCAAGAAAGCTCAAATCCTTCAGACTCACATTCCTTCCTCTGTTGACAAGATTTTGCAGGATGAAATGAATGCTATCTCCTATAGAGTGCTTGCCTATCTTCTTCTTGGTGTTGTCAGAATATATTCAAAGAAGGCTGAATATTTGTTAGATGATTGCAATGGGATGCTTGTTAGAATCAATAAGTTCGTGATCAAAACAAAAGACAAAGCACCCATGGAAACAATGCGGATGTCTGTTATTATACCAGACAGATTTGAGCTGGATGCTTTTGATCTAGACATACTTGAAGATGCTGGCGGAGGCCATATTGCTTCACAGGAGGAAATTACTCTTAAAGATGTTGTGTGTAGCAATGAGGGATTTGGGCTGTTTTCTCTAGACAAGGTATGTCTTCCATGTGTTCCATAG 480 0.4042 MSYSRFLSSSKGPLWVAAYCFKHLKKAQILQTHIPSSVDKILQDEMNAISYRVLAYLLLGVVRIYSKKAEYLLDDCNGMLVRINKFVIKTKDKAPMETMRMSVIIPDRFELDAFDLDILEDAGGGHIASQEEITLKDVVCSNEGFGLFSLDKVCLPCVP* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3170 159 PANTHER SCC1 / RAD21 FAMILY MEMBER 1 152 IPR039781 GO:0007062|GO:0008278
Amo16g3170 159 PANTHER SISTER CHROMATID COHESION 1 PROTEIN 2 1 152 - -
Amo16g3170 159 Pfam N terminus of Rad21 / Rec8 like protein 1 91 IPR006910 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3170 Amo-Chr16 135824033 135826963 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3170 K06670 - jre:109009177 187.193