Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3067 GAGCAAATAAAAAACAAAAGTGAGGAGGAGGAAAGCAGTGAAAAAAAAAAAAAAAACAAGAAGAGCACGAAGAAGATGTTGAGGGTTGCAGCAAAGAGGTTTTCTCCTCTGTCTTCGTCTTCATGGAGAGCTAACCATGCTACCTCTGCTTTTGTCTCTCGGAACCCCATCGCCCCTCACTATGAGTCCCACGATCGCGGATCCGCTCCCCAACCCCAATTCTTTCTCCCATTCCGAGGTTTTGCTACTGGATTGCCAGTCCATACAAACGAAAACATTATTCCTGAAATTCCAGCAACTGTTGCTGCTGTCAAAAACCCTTCCGCTAAGATTGTATACGATGAACACAATCATGAACGATATCCTCCTGGTGACCCAAGCAAGAGGGCATTTGCTTACTTTGTCCTAACAGGTGGTAGATTTGTCTATGCCTCTCTGGTCCGTCTCCTTATCCTCAAGTTTGTTCTCAGTATGTCGGCCAGTAAGGATGTTCTTGCTCTGGCTTCACTTGAAGTTGATCTCTCCAGCATTGAGCCAGGCACCACTGTGACTGTTAAATGGCGTGGAAAGCCCGTGTTCATCAGGCGCAGAACAGAGGATGATATTAAGCTGGCAAACAGCGTTGACATTGGATCTCTTCGCGATCCCCAGCAGGATGCGGAGAGAGTCAAGAACCCTGAGTGGCTCATTGTGATTGGGGTTTGCACACATTTGGGTTGTATTCCCTTGCCGAATGCTGGTGACTTTGGTGGTTGGTTTTGCCCCTGTCATGGTTCACATTACGATATTTCTGGCCGAATTAGGAAGGGACCAGCGCCATACAATCTGGAGGTGCCAACTTATACCTTTTTGGAAGAGAACAAGTTGCTAATTGGTTGA 879 0.4687 EQIKNKSEEEESSEKKKKNKKSTKKMLRVAAKRFSPLSSSSWRANHATSAFVSRNPIAPHYESHDRGSAPQPQFFLPFRGFATGLPVHTNENIIPEIPATVAAVKNPSAKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDAERVKNPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLLIG* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3067 292 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 202 290 IPR017941 GO:0051537
Amo16g3067 292 SUPERFAMILY ISP domain 154 291 IPR036922 GO:0051537
Amo16g3067 292 TIGRFAM Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 142 292 IPR006317 GO:0008121
Amo16g3067 292 SUPERFAMILY ISP transmembrane anchor 109 165 - -
Amo16g3067 292 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 26 292 IPR014349 GO:0051537
Amo16g3067 292 Pfam Ubiquinol cytochrome reductase transmembrane region 114 163 IPR004192 GO:0008121
Amo16g3067 292 Gene3D - 161 292 IPR036922 GO:0051537
Amo16g3067 292 CDD Rieske_cytochrome_bc1 169 292 - -
Amo16g3067 292 PRINTS Rieske 2Fe-2S subunit signature 230 241 IPR005805 GO:0016020|GO:0051537
Amo16g3067 292 PRINTS Rieske 2Fe-2S subunit signature 264 276 IPR005805 GO:0016020|GO:0051537
Amo16g3067 292 PRINTS Rieske 2Fe-2S subunit signature 252 264 IPR005805 GO:0016020|GO:0051537
Amo16g3067 292 MobiDBLite consensus disorder prediction 1 27 - -
Amo16g3067 292 MobiDBLite consensus disorder prediction 1 17 - -
Amo16g3067 292 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 26 292 - -
Amo16g3067 292 Pfam Rieske [2Fe-2S] domain 175 278 IPR017941 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3067 Amo-Chr16 132924558 132927658 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3067 K00411 - gmx:100806917 452.981