Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3022 ATGATGAACGGAATTCAGTATTGGGGTGAAAGTTCCAGTTCGACGTCACTAAGCAGTCCGCAAGATGTTGAGGATGACCGGATGATAGCTCTCGTGTTGTCCGAAGAGTATGCCAAATTAGATGGTGAAGTTGGTAGACGTCTTTCCAGCTTGGCACCTGTTCCGCATGTGCCCCGGATAAACAATTTCATCCCAAACACAAGTGATGCCAGTATGGATCATCAGCGTCTTCTTCAGAGGTTGCAGATCTATGGTCTTTGTGAAGTTAAAGTCTCTGGAGATGGGAACTGTCAGTTCCGTGCACTTTCGGATCAGCTCTTTAGGTCACCTGAACATCACAAGCATGTTCGAAAAGATATTGTAAAACAGCTAAAAGGTCACCGTTCCCTGTATGAATGCTATGTACCGATGAAGTATAAAAAATATTGCAAGAAAATTTCAAAGTCTGGAGAATGGGGAGATCATTTGACATTGCAGGCAGCTGCTGATAAGTTTGCAGCAAAAATATGCCTTTTGACTTCATTCAGAGACACTTGTTTCATTGAAATTATGCCTTTGCACCAAGCACCGAAACGCGAGTTGTGGTTAAGCTTTTGGTCTGAGGTTCATTACAACTCACTCTATTCAATTCAAGCTGCACCACCGCCTCAACCACCAAGGAGGAAACATTGGTTGTTCTAG 681 0.4347 MMNGIQYWGESSSSTSLSSPQDVEDDRMIALVLSEEYAKLDGEVGRRLSSLAPVPHVPRINNFIPNTSDASMDHQRLLQRLQIYGLCEVKVSGDGNCQFRALSDQLFRSPEHHKHVRKDIVKQLKGHRSLYECYVPMKYKKYCKKISKSGEWGDHLTLQAAADKFAAKICLLTSFRDTCFIEIMPLHQAPKRELWLSFWSEVHYNSLYSIQAAPPPQPPRRKHWLF* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3022 226 ProSiteProfiles OTU domain profile. 86 210 IPR003323 -
Amo16g3022 226 SUPERFAMILY Cysteine proteinases 70 210 IPR038765 -
Amo16g3022 226 MobiDBLite consensus disorder prediction 1 21 - -
Amo16g3022 226 Gene3D - 67 214 - -
Amo16g3022 226 PANTHER OTU DOMAIN CONTAINING PROTEIN 10 226 - -
Amo16g3022 226 Pfam OTU-like cysteine protease 93 184 IPR003323 -
Amo16g3022 226 PANTHER OS04G0402300 PROTEIN 10 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3022 Amo-Chr16 131597939 131603248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3022 - - ahf:112754938 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3022 16 131597939 131603248 Amo16g3022 16 131597939 131603248 ECH
Amo16g3022 16 131597939 131603248 Amo06g2389 06 84534408 84539696 hybridization