Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3010 ATGGAACTTGCAGTGAAGGTGGCTGAAGCTGTCCATGTGCTGAACCACGATACCCAATCGTGCAACCGCGTCGCAGCGAATCAGTGGCTCGTTCAGTTCCAGCAAACACACGCCGCCTGGGACGTTGCCACCGCCATCCTCACCGCCGATCGCCGCCACAATCCTCTCCCCGCCAATTTCGAGGTGGAGTTCTTCGCTGCCCAGATTCTCAAACGCAAGATACAAAATGAGGGTTATCTACTGCAATTAGAAGCTAAGGATGCTTTGTTAAACGCCCTTCTTGTTGCAGTCAGGAGATTCAGCACTGGGCCTCCCCAGCTTTTAACACAGATTTGTCTTGCACTCTCTGCCCTTGTTCTTCAAGTTGTTGCGCATGGAAACCCAATTCAGCAGCTTTTTTACAGTCTGCAGAATTTGCAGAGCCAGGATAATGGTAATATTGCCGTCCTGGAGATGCTCACTGTCCTGCCAGAGGAAGTTGTTGATAATGAACGACCTGATTCTAAAATTAGTTCATTACAAAAAAGCCATTATACACAAGAGCTTCTATCGCATACGCCTATGGTTCTTGATTTCTTGCTGCAACAATCTGAACTAAGTTTTGATGGTTCTGTGCAACAGCATGAAAGGAATCGGAAAATTTTGCGTTGCTTATTGAGCTGGGTTAGAGCAGGATGCTTCTCGGAGATTTCCCAGGGAACATTGCCAGCTCACCCACTTCTGAATTTTGTGTTCAACTCATTGCAGGTACCTTCCTCATTTGATTTGGCCGTTGAAGTACTCATTGAACTTGTGAGTAGACATGAGGGAGTGCCTCAAGGTCTGTTATGCAGAGTACATTATTTAAAGGAAGTACTTCTCCTTCCAGCTCTTACTAGGGGAGACATGAAAATAATTGGGGGCCTTGCATGCTTGTTGTCAGAAATTGGGCAGGCTGCTCCGTCCCTTATAGTAGAAGCAAGTCCAGAATCCCTTGCATTGGCAGATGCACTCCTGAGCTGCGTGGCATTTCCGTGTGAAGATTGGGAGATTGCAGACTCTACACTGCAGTTTTGGTCCKCTCTTGCAAGCTATATCCTTTGCCTTGATGAGGATGGTGCAAAACATAGGAAACATGTGGAGGAAACTTTTTCACCTGTCTTCTCAGCATTACTTGATTCATTGTTGTTGCGATCTCAGGTGGATGATTCTACATACAATGATGACAGAAGAGTGATTGAGTTGCCTGATGGTCTTGTCCATTTCAGGATGAATCTAGTAGAACTTTTTGTGGATATATGTCACCTTTTAGGATCTTCCATATTTATACAAAAGCTCTTTATTGCTGGGTGGGCATCTCCAAATCTACCAATCCCTTGGAAGGAAGTGGAAAGCAAGCTGTTTGCTCTTAATGCTGCCGCTGATGTGATAATACAGAATGGCCAGAGTTTTGATTTCTCTATGGTCATGCAGATTGTGACCATGTTGTCCACAAAGCCGTCAGATGGGTTGAAGGGTTTCAACTGCATTGTATACAGATCTCTAGCAGAGGTGATTGGTTCCTATTCTAAGTGGATATCTTCTTTCAAGGAAAATTTTAGGCCCTTGTTATTATTTCTTGCTATAGGGATTTCAGAGCCTCTATCCTCGAATGCTTGTGCGTCTACCCTGCGGAAAGTCTGTGAGGATGCTTCTATAGTAATTTATGAACCTTCAAATTTGGAAGTTCTGATGTGGATAGGGGAGGGGCTAGACAAGTGGCATTTATCAATGGAAGATGAGGAAGAAGTAATGAATGCTATAAGTCTGATCCTTAGTTCTGTTCCCAACAGAGAACTGAAGAGCAACTTATTGGCTAGATTTCTTTCTTCTAGCTATGAAGCAATCGGGAAACTTGTTGATCCAGAGACCAGCCATTCTCTTAAGCAGAACCCTGCTTCCTATATGCAAGTTTTGAATGCTGCCTCTAGAGGGTTACACAGAATGGGAACTGTATTCAATCATCTTTCTATATCTGCGGTGGCTGAACCTGCTGCAGATGACTCCATACTTTCACTCTTACGGGTYTTCTGGCCCATCTTGGAGAAAGTTTTTAGCTCTGAACATATGGAGAGTAGTAATTTATCCATGGCAGCYTGCCGAGCTCTTTCGCTAGCTATTCAATCTTCAGGTCAGCATTTTGCAACATTATTGCCGAAAGTGCTGGATTGGCTTTCAACAAATTTTGTTTTGTACCAAAGTCATGAGTATTACATAAGAACCGCTTCCATTGTCATTGAGGAGTTTGGTCACCGAGAGGAGTACGGACCTTTATTTGTCACCACATTTGAAAGGTTTACTCATGCAGCTTCTGTAATGGCTCTAACTTCCTCCTACATATGTGACCAAGAACCTGACTTAGTGGAGGCGTACACCAATTTTGCATCTACATTTATTCGTTCCTGTAACAAGGATGCCCTTTCATCCTGTGGTTCTCTTCTTGAAGTTTCTATCCAAAAAGCTGCTATATGCTGCACAGCAATGCACCGCGGAGCTGCGCTGGCCGCAATGTCATATTTGTCTTGTTTCTTAGATGTGGGCCTTGTCTCGCTGTTAGAACATATTAATTGTATTCTTGAAGGGTCATTCAACGCCACAACCATCCATGTCATTTCTCACAGTGGTGAGGGGCTTGTATCCAATGTGGTTTATGCTTTACTTGGTGTATCTGCAATGTCCCGGGTTCACAAATGTGCAACAATTCTTCAACAACTGGCTGCAATTTGCACATTATCCGAAAGAACAACATTGAAGTCTATACTTTGCTGGCAAACTCTGCATGGATGGCTACAGTCAGCAGTTCAGGCTCTTCCTGCTGAGTACCTAAATCATGGAGAAGCGGAGACCTTGGTGCCACTTTGGTCAAAGGCCCTTGTCGATGCAGCCGCTGATTATCTCGAGAGCAAGAACTCCAATGGATTGAAGAGTAATTACGGGCATATGCAAGGGAAGGGTGGCAGAGTTTTAAAGCGCCTTGTCCGGGAATTTGCCGATTCTCACCGGAATATACCAAATCTAACTTGA 3042 0.4425 MELAVKVAEAVHVLNHDTQSCNRVAANQWLVQFQQTHAAWDVATAILTADRRHNPLPANFEVEFFAAQILKRKIQNEGYLLQLEAKDALLNALLVAVRRFSTGPPQLLTQICLALSALVLQVVAHGNPIQQLFYSLQNLQSQDNGNIAVLEMLTVLPEEVVDNERPDSKISSLQKSHYTQELLSHTPMVLDFLLQQSELSFDGSVQQHERNRKILRCLLSWVRAGCFSEISQGTLPAHPLLNFVFNSLQVPSSFDLAVEVLIELVSRHEGVPQGLLCRVHYLKEVLLLPALTRGDMKIIGGLACLLSEIGQAAPSLIVEASPESLALADALLSCVAFPCEDWEIADSTLQFWSXLASYILCLDEDGAKHRKHVEETFSPVFSALLDSLLLRSQVDDSTYNDDRRVIELPDGLVHFRMNLVELFVDICHLLGSSIFIQKLFIAGWASPNLPIPWKEVESKLFALNAAADVIIQNGQSFDFSMVMQIVTMLSTKPSDGLKGFNCIVYRSLAEVIGSYSKWISSFKENFRPLLLFLAIGISEPLSSNACASTLRKVCEDASIVIYEPSNLEVLMWIGEGLDKWHLSMEDEEEVMNAISLILSSVPNRELKSNLLARFLSSSYEAIGKLVDPETSHSLKQNPASYMQVLNAASRGLHRMGTVFNHLSISAVAEPAADDSILSLLRVFWPILEKVFSSEHMESSNLSMAACRALSLAIQSSGQHFATLLPKVLDWLSTNFVLYQSHEYYIRTASIVIEEFGHREEYGPLFVTTFERFTHAASVMALTSSYICDQEPDLVEAYTNFASTFIRSCNKDALSSCGSLLEVSIQKAAICCTAMHRGAALAAMSYLSCFLDVGLVSLLEHINCILEGSFNATTIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATILQQLAAICTLSERTTLKSILCWQTLHGWLQSAVQALPAEYLNHGEAETLVPLWSKALVDAAADYLESKNSNGLKSNYGHMQGKGGRVLKRLVREFADSHRNIPNLT* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3010 1013 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 1012 - -
Amo16g3010 1013 Pfam Exportin 1-like protein 104 261 IPR013598 -
Amo16g3010 1013 SUPERFAMILY ARM repeat 1 876 IPR016024 -
Amo16g3010 1013 PANTHER TRANSPORTIN 3 AND IMPORTIN 13 1 1012 - -
Amo16g3010 1013 Gene3D - 3 965 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3010 Amo-Chr16 131111895 131128244 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3010 K15436 - gmx:100808691 1744.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3010 16 131111895 131128244 Amo16g3010 16 131111895 131128244 ECH
Amo16g3010 16 131111895 131128244 Amo06g2369 06 84184703 84201665 hybridization