Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3001 ATGGCATCATCAAGGGATTACGGGGACCCTCTTCTTGTTGGTGGTATAATTGGGGATGTTCTGAACCCTTTTACTAGCTCAGTTTCTCTTAAGGTTCTCATTAACAACAGAGAGATTAACAATGGCTGTGAACTGAGGCCCTCTCATGTTGTTAACCGCCCTAGGATTACTATTGGTGGTGAAGACCTCAGGACCTTCTACACACTGGTTATGGTGGATGCTGATGCACCTAGCCCTAGTAACCCTTTCTTGAGGGAATACTTGCACTGGATGGTGACAGATATTCCGGCTACCACAAACACCACCTTCGGGAAAGAGGTTATGTTTTATGAAAGCCCACAACCAAATGCAGGGATTCACCGATTTATAATTGTATTATTCAAGCAACTGGGAAGAGACACTGTTTTTCCCCCTGAATGGCGTCACAATTTCAATACCAGAGATTTTGCTTGCAATAATAGCTTGGCTCCTGTTGCCGCAGTTTATTTCAACTGTCAAAGGGAGCGTGGTTGTGGTGGAAGAAGAATGGAATAA 534 0.4419 MASSRDYGDPLLVGGIIGDVLNPFTSSVSLKVLINNREINNGCELRPSHVVNRPRITIGGEDLRTFYTLVMVDADAPSPSNPFLREYLHWMVTDIPATTNTTFGKEVMFYESPQPNAGIHRFIIVLFKQLGRDTVFPPEWRHNFNTRDFACNNSLAPVAAVYFNCQRERGCGGRRME* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3001 177 SUPERFAMILY PEBP-like 15 168 IPR036610 -
Amo16g3001 177 Pfam Phosphatidylethanolamine-binding protein 54 160 IPR008914 -
Amo16g3001 177 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 9 176 IPR035810 -
Amo16g3001 177 PANTHER FTC 9 176 - -
Amo16g3001 177 Gene3D - 5 171 IPR036610 -
Amo16g3001 177 CDD PEBP_euk 35 165 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3001 Amo-Chr16 130751784 130755232 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3001 K16223 - aip:107648378 353.599