Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2999 ATGGCAAATCCTTTCTCAGATTTCAAGTACTCAGATGGTCTAACTGTAGTGGGCATCTCCTTCTGCACAGCTATTGTTTGTGAGGCTATCTCATGGGTTCTGATCTACCGCACCAATTCATACAAGAACCTTCGCTCTTCAATCGACAAAGCCTCCAAGAAGCTTGAGACAATGAAGACAGAGAGCAACAAAATCAACATCAAGAAGTCTAAGACCAAAAAAATTGACCGTGTTGAGACAAGCCTGAAAGAATCCAGTCGTGACTTGTCTCTCTTCAAATTCAAGTCTGGGGGTGTGGTTGCGCTAGTTCTCTTTGTGGTCTTTGGTTTGCTAAATTCACTCTTTGAAGGCAAGGTAGTTGCCAAATTACCCTTTAAACCTTTTGGTCTTGTTATGAAGATGAGCCATCGAGGGTTACAGGGTAGTGACCCCACTGATTGTTCCATGGCATTTCTATACTTCTTATGTTCCATTAGCATCCGAACAAATTTGCAGAAGTTCTTGGGTTTTGCACCACCAAGGGGTGCAAGCGGCAGCCTCTTTCCCATGCCCGATCCGAAGACCAGTTGA 570 0.4421 MANPFSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTESNKINIKKSKTKKIDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGSDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRGASGSLFPMPDPKTS* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2999 189 SMART DUF106_2 12 172 IPR002809 GO:0016020
Amo16g2999 189 PIRSF UCP023322_TM_coiled-coil 3 189 IPR008559 GO:0005262|GO:0030176|GO:0032469
Amo16g2999 189 Pfam Integral membrane protein EMC3/TMCO1-like 15 171 IPR002809 GO:0016020
Amo16g2999 189 Coils Coil 41 68 - -
Amo16g2999 189 PANTHER PNAS-RELATED 3 187 IPR008559 GO:0005262|GO:0030176|GO:0032469
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2999 Amo-Chr16 130643217 130646319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2999 K21891 - gmx:100782593 335.88