Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2966 ATGGCACAGTTCACAACGCATGGTCGCTTGAAGCTTCTCTTCAATGGCGAAAGCGTATCACCTTGTTTGGGTCACAAGGACCCTTTTCACTACAAGTGCAGATCAATTCACACCCACAAGAGAAGGGTGAGGTATATTGGTTCCTCTGCTAGAATTTACCATGCTTCATCTTCTCATAGAGGAAGAATTAGCCGTTGCAATGCTAAGGCACCCCGTATTAATGGCAATGAAGGTGTTCATGAGGAATATTATGATAATGATGATGATGAGGATGAGGATGAACATGAATATTCTTATGAAGATGGTGATGTTGATGATGTGTTTGAGGATGATGGGTTGTCTTGCTTCCGGGGTCTAGTGTTGGATATATCATACAGGCCAGTCAATGTTGTAGGCTGGAAGCGTGCGATATGTTTGGAGTTCATGGAGAAGGCAGATGTACTAGAGTATTATGCTAAGACCGTGAGCTCCCCGAGTGGATCTTTCTATATACCAGCTGTCTTAAGGGTTCCTCATTTACTTCAGGTTGTTAAAAGAAGAATAGTGAAGAACAATCTTAGTCGGAAAAATATACTATTTCGGGACAATTACACCTGTCAGTATTGCTCGTCACATGAGAATTTGACCATTGATCATGTGGTGCCAACTGCACGAGGTGGAGAATGGACGTGGGAAAATCTAGTGACTGCTTGTTCCAAGTGCAACTCAAAGAAAGGTCAGAAAACTTTGGAGGAAGCAAAAATGACATTAAATAAGATCCCAAAGGCCCCAAAGGAGTATGACATACTCGCCATGCCTCTAACTTCTGCAGCTCTAAGAATGCTGACAATAAGAAAGGGAACACCTGAAGAATGGCGGCAGTATCTAAGGTCCTCTTGA 879 0.4278 MAQFTTHGRLKLLFNGESVSPCLGHKDPFHYKCRSIHTHKRRVRYIGSSARIYHASSSHRGRISRCNAKAPRINGNEGVHEEYYDNDDDEDEDEHEYSYEDGDVDDVFEDDGLSCFRGLVLDISYRPVNVVGWKRAICLEFMEKADVLEYYAKTVSSPSGSFYIPAVLRVPHLLQVVKRRIVKNNLSRKNILFRDNYTCQYCSSHENLTIDHVVPTARGGEWTWENLVTACSKCNSKKGQKTLEEAKMTLNKIPKAPKEYDILAMPLTSAALRMLTIRKGTPEEWRQYLRSS* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2966 292 CDD HNHc 188 239 IPR003615 -
Amo16g2966 292 MobiDBLite consensus disorder prediction 70 96 - -
Amo16g2966 292 PANTHER SLL1193 PROTEIN 35 291 - -
Amo16g2966 292 Pfam HNH endonuclease 199 250 IPR029471 -
Amo16g2966 292 SMART HNH_5 186 236 IPR003615 -
Amo16g2966 292 PANTHER SLL1193 PROTEIN 35 291 - -
Amo16g2966 292 Gene3D - 175 264 - -
Amo16g2966 292 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2966 Amo-Chr16 129422133 129426300 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2966 - - gmx:100787021 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2966 16 129422133 129426300 Amo16g2966 16 129422133 129426300 ECH
Amo16g2966 16 129422133 129426300 Amo06g2258 06 80272730 80278250 hybridization