Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2955 ATGGCAGCTGTTACTCCTTCTTCTGACAAAGCTGCAGATTTACTGCAAAATTTGTCCCTGGATTCGGAGCCCAAGAACATGGGAGTTCCTGAGCCTGCAAAGAAGAATGGACCTGCTTTCTCCAATGGAGCAGCTAAGGGGATGAATAAGCCATTCAATCCAAATGCAAGTTTTGTTCCGAATGGGTACCATTCTACTGCATACTATTATGGAGGTTATGATGGGCAAAGTGACTGGAATATGTATTCTAGGTATATGAATGTTGATGGAGGAATGGCTCAAGGTGTTTATGGAGATAGCTGCTCTTATATGTACAATCAGGGTTATGGTTATACACCTTATGGAGCGTATCCACCACCGGCCACTTCTCCACCCATTCAACATGATGGTCAACTCTATGGGATGCAACAGTATCACTACCCTTCTTGTTATTACCAATCTCCAGCCTCTACTGATATGCCACATGCTCCCAACAAAATCGGTGTTCCACAAGGGGAGGAAATATCAACTGCAGTTAATGCCGATCATGTTCCTCCATCAAATGTCTTTAATAAAGGGAATACTGTTACCATGGCCAATGGCGACCGCTCAAACAAAAAAGGGTTGAATGCATTTCTAACAGGTTCCCAGCATGGTTCTTTGAATTCAAATGATTTTTATCAGGTGGCTAACATGCCGGCATGTGTCCCTTTGTCTGGGCATCAGGGTCCAAGAATTAGCACCCATGGCCAACAGTCGGCCTTTCCTTCAGATGTTCCATTAATTTCTGATAGGCAGTCCAAACATGGAGCAAAGGCTGGAATATCTTCATCTGTTGGTCCTCTCAAAGATTTCAATGCACAAAGGAATCAAAGGCTACCTCAGCCACTTCCGCAATTCACGAACTTTCACAGTTCCAGAAGCCCATCTGGACTGGAACTGGTTTCTGGTTTCATGAACAGGATGTATCCGATCAACAGCGTGTACAGTCGATACGGAAACACATTTAGAGCTGATTCTCGTTATGGATCCACTGCATATGGATCCAGAGCTGGATTCGAGAATAAGCTGAGAGGCACAGGTGATGGTTATGGTGTTGACCATTTAAGAAAGAACGTTGATGGATTTGGCGAGATGAATAAAGGACCCAGATCTATCAGGAATTCTGATAATAAGGGCACTAAAAGTCTTGGACCTGTCACCTTATTACTGAAGGGACAGGACCTTCCAGTGAAGAGTGATTCAGATAACAAGGAAGCGACACTGGCTCCCAAGAAGGAGCAATACAATGGGGAACATTTTCCTGAGAATTACACTGATGCAAAATTCTTTGTTATTAAATCCTATAGCGAAGATGATGTTCACAAAAGTATAAAATATAGCGTTTGGGCTAGCACCCCTAATGGAAATAAAAAGCTGGATGCAGCATATCAGGAAGCCAAGGAGAAGTCTTGTCCCATATTTCTGTTATTTTCGGTCAACACTAGTGGGCAATTTGTTGGTTTAGCAGAGATGGTTGGCCCTGTCGACTTCGGCAAAACTGTAGAATACTGGCAGCAGGACAGGTGGACCGGTTGCTTTGCCGTCAAGTGGCATATAATAAAGGACATCCCAAATAGCATTTTGAGGCACATAACACTGGAGAACAATGAGCATAGACCTGTTACAAATAGCAGGGACACTCAAGAGGTTCAGTTTGACAAGGGCATTCAGATTGTCAAAATTTTCAAGGAGCATTCAAGCAAAGCATGCATCTTGGACGATTTTGGGTTTTACGAGACACGGGAAAAGGCCACTCAGGAAAGGAAATCCAAGGAACATGCAAAACAGGTTAGCAACCCTAGTGAAATAACAATTGGGACAATTGTATTACCCAAATCTCTTGAGGGCTCATTGCTGAATGGATCAGCCGCTGCTGATGCAACCGAAGGAAAAGGGAATGGAGCCATCACAGTACTTGAAAACTCCTCGAAAAGCTGTTAA 1962 0.4358 MAAVTPSSDKAADLLQNLSLDSEPKNMGVPEPAKKNGPAFSNGAAKGMNKPFNPNASFVPNGYHSTAYYYGGYDGQSDWNMYSRYMNVDGGMAQGVYGDSCSYMYNQGYGYTPYGAYPPPATSPPIQHDGQLYGMQQYHYPSCYYQSPASTDMPHAPNKIGVPQGEEISTAVNADHVPPSNVFNKGNTVTMANGDRSNKKGLNAFLTGSQHGSLNSNDFYQVANMPACVPLSGHQGPRISTHGQQSAFPSDVPLISDRQSKHGAKAGISSSVGPLKDFNAQRNQRLPQPLPQFTNFHSSRSPSGLELVSGFMNRMYPINSVYSRYGNTFRADSRYGSTAYGSRAGFENKLRGTGDGYGVDHLRKNVDGFGEMNKGPRSIRNSDNKGTKSLGPVTLLLKGQDLPVKSDSDNKEATLAPKKEQYNGEHFPENYTDAKFFVIKSYSEDDVHKSIKYSVWASTPNGNKKLDAAYQEAKEKSCPIFLLFSVNTSGQFVGLAEMVGPVDFGKTVEYWQQDRWTGCFAVKWHIIKDIPNSILRHITLENNEHRPVTNSRDTQEVQFDKGIQIVKIFKEHSSKACILDDFGFYETREKATQERKSKEHAKQVSNPSEITIGTIVLPKSLEGSLLNGSAAADATEGKGNGAITVLENSSKSC* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2955 653 MobiDBLite consensus disorder prediction 1 46 - -
Amo16g2955 653 MobiDBLite consensus disorder prediction 368 390 - -
Amo16g2955 653 Pfam YT521-B-like domain 434 570 IPR007275 GO:0003723
Amo16g2955 653 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 1 653 IPR045168 -
Amo16g2955 653 Gene3D ph1033 like domains 411 583 - -
Amo16g2955 653 ProSiteProfiles YTH domain profile. 434 569 IPR007275 GO:0003723
Amo16g2955 653 PANTHER EVOLUTIONARILY CARBOXY-TERMINAL REGION PROTEIN 1 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2955 Amo-Chr16 129093424 129097457 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2955 - K20102 gmx:100818027 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2955 16 129093424 129097457 Amo16g2955 16 129093424 129097457 ECH
Amo16g2955 16 129093424 129097457 Amo06g2252 06 80131504 80135516 hybridization