Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2927 ATGGCGACGGAGCAGCAAGTGGCCTTGATCCTTGGCTCCGACCCGACTCACCTCGAATCCCTAATCCAGACGCTGACGTCAGCCACCACCAACGACCAGCGGGCCCAGGCCGAGTCCCTCTTCAACGCCTGCAGGCAAGCCCAGCCCGACTCCCTCTGCCTGGGCCTTGCCAGCCTCCTGCACTCCTCCCCTAATCCCGAGACCCGCACCGTCTCCGCTGTCCTCCTCCGTCGCCACCTCACCCCCCGAGGCGGTGACGATTCCTCGTCCTTCCTCTGGCCCCGCCTCTCCCCCTCCACCCACTCCACCCTCAAGTCCCTCCTCCTCACCTCCCTCCACCGCGAGCCCGTCACCTCCATCGCCAAGAAACTCTCACATACAGTCGCCGAGCTCGCCTCCGCCCTCCTCCCTAACAACGCCTGGCCTGACCTACTCCCCCTCCTCTTCCAGTGGGTGACCTCCGACCAACCCAAGCTCCAGGAGATTTCCCTCCTCATATTCGCCGAGCTTGCAGACTACGTTGGCGAGGCTCTAATTCCTCAATTGACGACCCTCCACGCCGTTTTCCTCCGCTGCCTCGGCCCCTCGTCCACCTCCGATGTCAGAATTGCCGCCCTGGCAGCCAGCATTAATTTCGTGCAGAGGTTGACGAGTTCTTCCGATAGGGACAGGTTCCAGGATTTGCTTCCGCTGATGATGCAGACGCTGACGGAGGCGCTGAATTCCGGTCAGGAGGCTACTGCACAGGAGGCGCTGGAGCTTTTGATTGAGCTTGCTGGTACCGAGCCAAGGTTCCTCCGGCGGCAAATTGTGGAAGTGGTAGGGTCCATGCTGCAGGTTGCTGAGGCTGAGTCCTTGGAGGAGGGGACAAGGCATTTGGCTATTGAATTTGTGGTGACTTTGGCTGAGGCGAGGGAAAGGGCGCCGGGGATGATGAGGAAGTTGCCACAGTTTATTAGGAGGCTGTTTGGGGTTCTGATGAATTTGTTGCTTGATGTGGAGGATGATCCTACTTGGCACAGTGCCGAGCTAGAGAATGAGGATGCTGGGGAGACCAGCAATTATGGTTTTGGACAGGAGTGTTTGGATAGGCTGGCTATTTCTTTGGGTGGGAACACAATTGTGCCGGTTGCCTCCGAGCTTCTGCCAGGTTACTTGGCTGCTCCTGAGTGGCAGAAGCACCATGCTGCCCTCATTGCACTTGCGCAAATTGCAGAGGGTTGTTCAAAGGTGATGATAAAGAATTTGGAGCATGTGCTATCAATGGTTTTAAGTTCATTTAGTGATGCTCACCCGCGTGCACGATGGGCAGCTATAAATGCAATTGGCCAATTGTCCACAGATTTGGGGCCAGACTTGCAGACTAAATATCATCACTTGGTGCTGCCAGCGTTAGCTGGTGCCATGGATGATTTTCAAAATCCCCGTGTGCAGGCTCATGCTGCATCTGCAGTTCTAAATTTCACTGAGAATTGTACCCCGGAGATCCTAACACCTTACTTAGATGGGATTGTGAGCAAGCTTCTTGTACTCCTGCAGAATGGGAAGCAAATGGTTCAAGAAGCGGCTTTGACAGCTTTAGCTTCAGTTGCTGATTCGTCACAGGAGCAATTTCAGAAGTATTATGATGCTGTGATTCCTTACTTAAAGGCTATTTTGATGAATGCAAATGATAAATCTAATCGAATGCTTCGTGCCAAAGCAATGGAGTGCATTAGTTTAGTAGGAATGGCTGTTGGGAAGGAGAAGTTCAGGGATGATGCCAAACAGGTCATGGATGTATTGATGTCACTGCAACAATCCCAGTTGGAGGCTGATGATCCGACTTCAAGTTACATGTTACAAGCATGGGCACGGCTTTGCAAATGCCTTGGGCAGGATTTTCTACCATATATGGGTTTTGTCATGCCTCCTTTGCTACAGTCTGCACAACTTAAGCCAGATGTGACCATTACATCAGCAGATTCTGATACTGAATTCGATAATGATGATGACAGCATCGAAACAATCACTCTTGGGGATAAAAGGATAGGAATTAAGACAAGTGTCCTGGAGGAGAAGGCTACAGCCTGTAACATGCTTTGTTGCTATGCAGATGAGTTGAAGGAAGGATTCTTTCCTTGGATTGAACAGGTTGCTTTTACATTGGTTCCTCTTCTTAAATTTTACTTCCATGAAGAAGTTAGGAAGGCGGCAGTTTCAGCTATGCCGGAACTGTTATCATCAGCAAAATCAGCTGTAGAAAAAGGGCAAGCACAAGGTCGTGATGAGACCTACATAAAACAGCTGTCTGATTATATAATACCAAATTTGGTGGAGGCTCTACACAAGGAGCCAGAGGTAGAAATTTGTGCAAGCATGTTGGATGCATTGAATGAATGCATACAGGTCTCTGGACCACATCTAGATGAAAAGCAAGTACGAAGCATTGTTGATGAGATAAAACAAGTCATTACAGCCAGTTCATCAAGAAAACACGAAAGAGCAGAGAGGGCCAAGGAAGAGGACTTTGATGCTGAGGAAAGAGAACTACTCAAAGAAGAAAATGAGCAAGAAGAAGAACTTTTTGATCAAGTTGGCGATTGCTTGGGCACTTTGATAAAGACATTTAGAGGGTCTTTCTTGCCTTTCTTCGATGAGCTTTCATCGTACCTAACGCCCATGTTTGGTAAAGATAAAACTTCAGAGGAAAGGAGGATTGCCATTTGTATATTTGACGATGTTGCTGAGCATTGTCGTGAGGCAGCTCTCAAGTACTATGATTCCTACCTTCCATTCTTACTTGAGGCTTGCAATGATGAATATCCAGATGTTCGGCAGGCAGCTGTTTATGGGGTTGGTGTTTGTGCGGAGTATGGCGGATCTGTTTTCAAACCCCTTGTTGGAGAGGCGCTCTCAAGGTTAGATGCTGTTATAAGGCATCCGGATGCACTGCATTCTGATAACATAATGGCATATGACAATGCTGTTTCAGCTGTTGGAAAAATATGTCAGTTCCACCGCGATAGCATAAATGCAGCCCAGGTTGTTCCTGCCTGGCTAAGTTGCTTGCCTATTAAAGGTGATTTAATCGAGGCCAAGGTTGTGCATGACCAACTTTGTTCAATGGTTGAAAGGTCTGATAGAGAACTCATAGGGCCAAACAATCAATATCTTCCCAAAATAGTTGCGGTTTTTGCCGAGATTCTATGCGCTGGTAACGATCTGGCTACTGAACAAACTTCCAGTAGGATAATCAATTTGTTGAGGCAACTTCAACAAACTTTGCCGCCTCATACCCTCGCTTCGACCTGGTCATCCTTGCAGCCTCAGCAGCAGCTTGCTCTGCAGTCGATCCTATCGATATCAACCTAG 3354 0.4905 MATEQQVALILGSDPTHLESLIQTLTSATTNDQRAQAESLFNACRQAQPDSLCLGLASLLHSSPNPETRTVSAVLLRRHLTPRGGDDSSSFLWPRLSPSTHSTLKSLLLTSLHREPVTSIAKKLSHTVAELASALLPNNAWPDLLPLLFQWVTSDQPKLQEISLLIFAELADYVGEALIPQLTTLHAVFLRCLGPSSTSDVRIAALAASINFVQRLTSSSDRDRFQDLLPLMMQTLTEALNSGQEATAQEALELLIELAGTEPRFLRRQIVEVVGSMLQVAEAESLEEGTRHLAIEFVVTLAEARERAPGMMRKLPQFIRRLFGVLMNLLLDVEDDPTWHSAELENEDAGETSNYGFGQECLDRLAISLGGNTIVPVASELLPGYLAAPEWQKHHAALIALAQIAEGCSKVMIKNLEHVLSMVLSSFSDAHPRARWAAINAIGQLSTDLGPDLQTKYHHLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCTPEILTPYLDGIVSKLLVLLQNGKQMVQEAALTALASVADSSQEQFQKYYDAVIPYLKAILMNANDKSNRMLRAKAMECISLVGMAVGKEKFRDDAKQVMDVLMSLQQSQLEADDPTSSYMLQAWARLCKCLGQDFLPYMGFVMPPLLQSAQLKPDVTITSADSDTEFDNDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIEQVAFTLVPLLKFYFHEEVRKAAVSAMPELLSSAKSAVEKGQAQGRDETYIKQLSDYIIPNLVEALHKEPEVEICASMLDALNECIQVSGPHLDEKQVRSIVDEIKQVITASSSRKHERAERAKEEDFDAEERELLKEENEQEEELFDQVGDCLGTLIKTFRGSFLPFFDELSSYLTPMFGKDKTSEERRIAICIFDDVAEHCREAALKYYDSYLPFLLEACNDEYPDVRQAAVYGVGVCAEYGGSVFKPLVGEALSRLDAVIRHPDALHSDNIMAYDNAVSAVGKICQFHRDSINAAQVVPAWLSCLPIKGDLIEAKVVHDQLCSMVERSDRELIGPNNQYLPKIVAVFAEILCAGNDLATEQTSSRIINLLRQLQQTLPPHTLASTWSSLQPQQQLALQSILSIST* 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2927 1117 Pfam HEAT repeat 924 952 IPR000357 GO:0005515
Amo16g2927 1117 Pfam Interferon-related developmental regulator (IFRD) 488 624 IPR007701 -
Amo16g2927 1117 Pfam Importin repeat 285 376 IPR041653 -
Amo16g2927 1117 Pfam Importin repeat 6 784 887 IPR041389 -
Amo16g2927 1117 SUPERFAMILY ARM repeat 17 954 IPR016024 -
Amo16g2927 1117 Gene3D - 15 1114 IPR011989 -
Amo16g2927 1117 Coils Coil 830 854 - -
Amo16g2927 1117 PANTHER IMPORTIN BETA 9 1114 IPR040122 GO:0006606
Amo16g2927 1117 PANTHER BNAC09G37860D PROTEIN 9 1114 - -
Amo16g2927 1117 SMART TOG_3 368 609 IPR034085 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2927 Amo-Chr16 128296117 128307152 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2927 K20222 - gmx:100797431 1851.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2927 16 128296117 128307152 Amo16g2927 16 128296117 128307152 ECH