Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2838 ATGGAGTTGGAACAAGGTGGTAGAGAAAGAATTGTGCATAATCATGTTAGTAAAGTTGGTTATGTGAATGGTGTGATAAACAAGAGGAAGAAGCCTTATAGAAGGGTTAAGAGGTCAGTGATTAGGGTTCCAAGGGCTCTTCAGGAACTCTTTGTTTCATGCAAAGACACATTCAAAAGCCCAGCCACTATTCCTTCACCACATCATGTTCAGACACTTTGCCGCATCCTAGATGATATAAAGCCAGAAGATGTTGGGCTGAGTAGAGATCTGCAATTCTTTAAGCCTGGAAAGAATATCATCAAAGAGAATCAAAGGGTCACTTACACAACCATGTACAAGTGTGACAATTTCTCTCTTTGCATCTTTTTTCTCCCTGAATCAGGAGTCATCCCCCTCCATAACCACCCTGGGATGACAGTTTTCAGCAAACTTCTCTTGGGAAAAATGCACATCAAGTCTTATGACTGGGTTGATGAGCTTGAGGCCGAGGTCGAGGTCGAGGCTGAGCCTTCCAACAATTTGATGCAACAAAATTCTAAAGTGAGATTGGCAAAGATGAAAGCAAATAGAGTGTTGACGGCACCATGTGACACTTCAGTGTTGTATCCAACAAGAGGGGGAAACATGCATGAATTCACAGCAATAACACCTTGTGCTGTTCTTGATGTAATTGGTCCTCCTTATTCCAAACAACATGGCAGAGATTGTTCTTACTACAAAGATCACCCTTATGCTGCTTTTTCTTCCAGTGAAGAGATGGATAAGGGGAAAGAAGCGAATGTATATTGGTGGTTGGAAGAAATTGAAGTGCCAGAGAACTCTCAAATGGATGGGATTGAGTACCTTGGTCCTCCCATTGGTGAACCATCCTTTTAG 879 0.4221 MELEQGGRERIVHNHVSKVGYVNGVINKRKKPYRRVKRSVIRVPRALQELFVSCKDTFKSPATIPSPHHVQTLCRILDDIKPEDVGLSRDLQFFKPGKNIIKENQRVTYTTMYKCDNFSLCIFFLPESGVIPLHNHPGMTVFSKLLLGKMHIKSYDWVDELEAEVEVEAEPSNNLMQQNSKVRLAKMKANRVLTAPCDTSVLYPTRGGNMHEFTAITPCAVLDVIGPPYSKQHGRDCSYYKDHPYAAFSSSEEMDKGKEANVYWWLEEIEVPENSQMDGIEYLGPPIGEPSF* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2838 292 SUPERFAMILY RmlC-like cupins 44 243 IPR011051 -
Amo16g2838 292 Gene3D Jelly Rolls 37 259 IPR014710 -
Amo16g2838 292 PANTHER UNCHARACTERIZED 33 287 IPR012864 GO:0016702
Amo16g2838 292 Pfam PCO_ADO 76 287 IPR012864 GO:0016702
Amo16g2838 292 PANTHER PLANT CYSTEINE OXIDASE 2 33 287 - -
Amo16g2838 292 CDD cupin_ADO 116 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2838 Amo-Chr16 125960812 125966733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2838 K23953 - gmx:100805411 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2838 16 125960812 125966733 Amo16g2838 16 125960812 125966733 ECH
Amo16g2838 16 125960812 125966733 Amo06g2151 06 77647192 77652452 hybridization