Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2644 ATGGGTTCACATAGTGCTGTTCTACTCCAAGTGTTCATAGCCCTTTGCCTTGTTGTGTTCCAAAGTTCTGCTGTTAAAGTAGATGCTGATCTAAACACAACCCTCACTGTAGATGCTTCTGATTCATCTGGAAGTCCGATACCGGACACCCTTTTGGGAATATTCTTTGAGGAGATAAATCATGCTGGTGCCGGGGGATTGTGGGCAGAGCTCGTAAGCAACAGAGGATTTGAAGCTGGTGGACCTAATACTCCATCAAATATTGATCCCTGGGCAATTATTGGAAATGTATCATATATAAATGTTGAAACTGATCGTACCTCCCTGTTCGATCGCAATAAGATTGCACTTCGGTTGGAGGTGTTATGTGACACAACAGGTGACAATATCTGCCCAACTGGCGGAGTTGGTGTCTATAACCCTGGTTTCTGGGGCATGAATATCGAGCAAGGGAAGAAATACAAAGTGGTCTTCTATGTTCGTTCAACAGGATCAATCAACTTATTAGTGTCATTCACCGGATCAAATGGTTTGGGAAACCTGGCTTCAGCTGAGATTACAGGTTCTGCTTCTGACGTTTCAAACTGGACAAAGGTAGAGACCATATTGGAGGCCAAGGCAACAGATCACAATGCAAGACTTCAATTAACAACAACCACAAAAGGTGTGATATGGTTGGACCAAGTGTCAGCTATGCCCCAGGACACATATAAGGGACATGGTTTCCGGAGTGACCTTTTTGGAATGCTAGCAAATATGAAACCAAGATTTATCAGATTTCCAGGTGGTTGTTTTGTTGAAGGAGAATGGTTAAGAAATGCGTTTCGATGGAAAGAAAGTGTTGGACCATGGGAGGAGAGACCTGGCCACTTTGGTGATGTTTGGATGTATTGGACTGATGATGGACTCGGCTATTTTGAGTTTCTTCAACTAGCAGAGGATTTGGGTGCAGCACCAATTTGGGTGTTTAATAATGGTATCAGCCATCAAGATCAAGTTGATACAACTGCCGTTTTACCTTTCGTCCAAGAAGCCCTTGATGGAATTGAGTTTGCAAGAGGTGATGCCACTTCAAAATGGGGTTCCCTTAGAGCTTCTATGGGACACCCAGAGCCATTTGATCTAAAATATGTTGCTGTTGGAAACGAGGATTGTAACAAAAAGAACTATAGAGGAAACTACCTGAAATTCTATAGTGCCATAAGAAGTGCTTATCCAGATATCCAAATCATTTCTAATTGTGATGCTTCTTCTCAACCATTGAATCATCCAGCTGATCTATATGATTATCATCTTTATACAAATGCCAAGGACATGTTTTCCAGAGCAACTGCATTTGACCGTACATCTCGTAGTGGACCAAAGGCTTTTGTAAGTGAGTATGCTGTGACTGGATCCGATGCCGGGACAGGAAGCCTTAAGGCGGCTCTAGCTGAAGCTGGTTTCCTTATTGGACTAGAAAGGAACAGTGATGTTGTCCACATGATTAGCTATGCTCCACTTTTTGTGAATACAAACGATAGGAGGTGGAACCCGGATGCAATTGTATTCAACTCCTATCAGTTCTATGGAACTCCTAGCTACTGGGTGCAACTATTCTTCTCGGAGTCAAGTGGAGCAACACTTCTTAAGGCATCGCTTCAGTCGACGCTATCTAATTCACTTGTTGCTTCAGCAATTACTTGGAAAAATCCTGTAGATGGGAACAATTATATACGGATAAAGGTTGTGAACTTCAACCTCAACGCAGTAAACCTTCACATCTCTTTTAATGGATTGGACCCAAACACAGTGCAGTTGTCCGGTTCAACCAAGACTGTGCTTACATCTTCAAGTTTGACCGATGAGAATTCCTTCTCACAACCAAAGAAGGTGGTGCCAATCCAGAGTCTACTTCAAAGTGTTGGAAGGGAAGTGAATGTTGTAGTGCCCCCATATTCCTTCACATCATTTGATTTTCTGAAGCAGTCCACTAATCTTGAGATTATAAGGAGTGATTCCTCTTCAAGGGCTTCTATTTAA 2022 0.4253 MGSHSAVLLQVFIALCLVVFQSSAVKVDADLNTTLTVDASDSSGSPIPDTLLGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWAIIGNVSYINVETDRTSLFDRNKIALRLEVLCDTTGDNICPTGGVGVYNPGFWGMNIEQGKKYKVVFYVRSTGSINLLVSFTGSNGLGNLASAEITGSASDVSNWTKVETILEAKATDHNARLQLTTTTKGVIWLDQVSAMPQDTYKGHGFRSDLFGMLANMKPRFIRFPGGCFVEGEWLRNAFRWKESVGPWEERPGHFGDVWMYWTDDGLGYFEFLQLAEDLGAAPIWVFNNGISHQDQVDTTAVLPFVQEALDGIEFARGDATSKWGSLRASMGHPEPFDLKYVAVGNEDCNKKNYRGNYLKFYSAIRSAYPDIQIISNCDASSQPLNHPADLYDYHLYTNAKDMFSRATAFDRTSRSGPKAFVSEYAVTGSDAGTGSLKAALAEAGFLIGLERNSDVVHMISYAPLFVNTNDRRWNPDAIVFNSYQFYGTPSYWVQLFFSESSGATLLKASLQSTLSNSLVASAITWKNPVDGNNYIRIKVVNFNLNAVNLHISFNGLDPNTVQLSGSTKTVLTSSSLTDENSFSQPKKVVPIQSLLQSVGREVNVVVPPYSFTSFDFLKQSTNLEIIRSDSSSRASI* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2644 673 Pfam Alpha-L-arabinofuranosidase C-terminal domain 460 647 IPR010720 GO:0046373|GO:0046556
Amo16g2644 673 SUPERFAMILY Galactose-binding domain-like 70 230 IPR008979 -
Amo16g2644 673 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1-LIKE 6 668 - -
Amo16g2644 673 SUPERFAMILY (Trans)glycosidases 213 542 IPR017853 -
Amo16g2644 673 SMART alpha_l_af_c 459 647 IPR010720 GO:0046373|GO:0046556
Amo16g2644 673 Gene3D - 537 653 IPR013780 -
Amo16g2644 673 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 6 668 - -
Amo16g2644 673 Gene3D Glycosidases 216 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2644 Amo-Chr16 116556485 116563823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2644 4 670 Glycoside Hydrolase AT3G10740 70.194 0.0 978
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2644 K01209 - gmx:100806458 1117.06