Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2611 ATGACTGCTCAGACCCAAGAAGAGCTTCTAGCTGAGCACCTCGAGCAGCAGAAGATCCATCATGATGAACCTGTAGTTGAAGATGATGAAGATGATGAGGATGACGATGATGAAGATGACGAGGATGATGACATTGCTGAAGGACATGAAGGTGATGTTGGTAGGTCCAAGCAGACACGGAGTGAAAAGAAGAGTCGCAAGGCAATGCTCAAACTTGGAATGAAACCTGTTACAGGTGTCAGCCGGGTGACAGTGAAAAAGAGCAAGAATATCCTATTCGTTATCTCAAAACCAGATGTTTTCAAAAGCCCAACATCCGACACATACATCATATTCGGGGAGGCCAAGATTGAAGACTTGAGCTCACAGCTACAAACTCAGGCAGCAGAGCAGTTCAAGGCCCCCAATTTGGCTAATGCAGGACCGAAACCTGAATCTTCTAGTGTTGCCCAAGATGACGAGGATGTGGATGAGACGGGAGTAGATCCCAAGGACATAGAGTTGGTGATGACTCAAGCTGGAGTGTCAAGATCAAGAGCTGTTAAAGCTCTCAAAGCTGCAAATGGCGATATCGTTGCGGCCATTATGGAGCTAACTACTTGA 603 0.4643 MTAQTQEELLAEHLEQQKIHHDEPVVEDDEDDEDDDDEDDEDDDIAEGHEGDVGRSKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNLANAGPKPESSSVAQDDEDVDETGVDPKDIELVMTQAGVSRSRAVKALKAANGDIVAAIMELTT* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2611 200 MobiDBLite consensus disorder prediction 1 72 - -
Amo16g2611 200 MobiDBLite consensus disorder prediction 48 69 - -
Amo16g2611 200 Pfam NAC domain 62 117 IPR002715 -
Amo16g2611 200 Gene3D - 68 121 IPR038187 -
Amo16g2611 200 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3 199 - -
Amo16g2611 200 MobiDBLite consensus disorder prediction 134 164 - -
Amo16g2611 200 CDD UBA_NAC_euk 163 199 - -
Amo16g2611 200 Gene3D - 161 198 - -
Amo16g2611 200 MobiDBLite consensus disorder prediction 26 47 - -
Amo16g2611 200 MobiDBLite consensus disorder prediction 11 25 - -
Amo16g2611 200 ProSiteProfiles NAC A/B domain profile. 59 124 IPR002715 -
Amo16g2611 200 SMART NAC_2 62 118 IPR002715 -
Amo16g2611 200 Pfam HYPK UBA domain 160 199 IPR044034 -
Amo16g2611 200 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 3 199 IPR016641 GO:0005854
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2611 Amo-Chr16 115087604 115090388 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2611 K03626 - gmx:100791967 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2611 16 115087604 115090388 Amo16g2611 16 115087604 115090388 ECH