Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2602 ATGGTGAATACTGGATTGCTTTCTGGAAGCAAATCAGTGAAGATAACCTTCCAGTTACCATATTTCACCCATTGGGGTCAGAGTTTGCTGGTGTGTGGTTCTGTGTCAGTGCTCGGTTCGTGGAATGTGAAGAAGGGTGTGCTGCTCACCCCCATTCATCAAGGGGCTGAGCTCATCTGGAGTGGCAGCATCACAGTGCCAAAAGGGTTCCAATGCCAATACCAATATTATGTGGTAGATGATAATAGAAATGTTCTGCGGTCTGAGATGGGAAAGAGGCGCGAATTGGCGCTCCCTGAAGGCATACAGAGTGGGCAGGAGATCGAGTTCCGTGATCTTTGGCAGACAGGCTCAGATGGTATCCCTTTTCGAAGTGCTTTTAGAGATGTTATTTTCCGGCAAAGCTGGGATCCGAGCAAAGAGGCAGCTGCCATAGAAGCCAACAATAGTAAATTTGAGCTGGAAGCGGAATCCATAGTCATTCTGTTCAGGATAAACTGCCCAAGCATTGAGAAAGACACATCAATATGTGTGATTGGAAGCCATGAAAAGTTAGGGAAGTGGAAGCCTGAAAATGGATTAAAACTCAGATATTGTGGCAAATCCATGTGGCAAGCTGAATGTCTGATGAAAAGGAGTGATTTTCCAATAAGGTATAGATATTGCAAATATGGTGGGGCTGGCAATGTTTCTATAGAGAATGGCCTAAATCGTGAAGTCTCCATTAGCTCCTCAAGGAGTGAGGCAAAATATATATGTCTTTCAGATAGCATGATGCGAGAAACACCTTGGCGTGGTGCTGGTGTGGCGATCCCTATGTTTTCTGTTAGGTCGGAATGTGATCTCGGAGTTGGAGAGTTTCTTGACCTTAAATTACTAGTAGACTGGGCTGTAGCATCCGGATTTCATTTAGTTCAACTTTTACCTATCAATGACACATCAGTTCACAGGATGTGGTGGGATTCTTATCCATACAGTTCACTATCAGTATTTGCATTGCATCCATTGTACCTGCGAGTTCAAGCACTTTCTAAGAACATACCTAAGGAGATCAAGGAAGAGATTGAGAAGGCAAAACAACAATTGGATTTGAAGGATGTTGATTATGAGGCTACAATGGCTGCTAAACTCTCAATTGCCAAGAAAATTTTCGACCTAGAGAAAGATGTGATACTTAACTCGAGTTCCTTTAAGGAGTTTTTTGCAGAGAACGAGGGTTGGTTGAAACCCTATGCTGCCTTCTGTTTCCTGCGGGACTTTTTCGAGACATCAGATCGCACTCAATGGGGTTGTTTTGCTCATTATTCAGAAGATAAGCTTGAGAAACTTGTATCAAAGGAAAGCTTGCATTATGAGATAATTTGCTTCCAATACTATATTCAATACCATCTACACTTACAATTATCTGAAGCTGCAGAATATGCGAGAAAGAGGAGAGTGGTTCTAAAGGGAGATCTTCCTATTGGAGTTGATAGGAACAGTGTTGATACTTGGGTTTATCCAAATCTGTTCCGAATGAATACTTCCACAGGAGCACCTCCAGATTATTTTGATAAGAACGGCCAGAATTGGGGCTTTCCAACTTATAATTGGGAAGAAATGTCAAAAGACAACTATGGCTGGTGGCGAGCTCGCTTGACACAGATGGCAAAATATTTTACAGCTTATAGGATTGACCACATATTGGGATTCTTTCGAATCTGGGAGCTTCCAGATCATGCTGCCACTGGTTTAGTTGGAAAATTCCGACCATCTATTCCTCTAAGTCAGGAGGAACTTGAAAGGGAGGGCATATGGGACTTTAATCGCCTGAGTCGTCCATACATTAGGCAGGGACTCTTGCAGCAAAAATTCGGAGCTGCTTGGGCATTTGTTGCAACAACTTTTCTGAATGAATATGAGAAGAACTGCTATGAGTTCAAGGAGGATTGCAACACAGAGAAAAAAGTTGTTTCCAAGCTAAAAAGTTGTGCTGAAAGTTCCCTCTTGTTAGAGAGTGAAGACAAACTGCGGCGCACCCTCTTTGATCTTTTACAGAATATAGTTCTTATCCAAGATCCAGAGGATCCAAGAAAATTTTATCCTCGTTTCAACCTTGAGGATACTTCAAGCTTCAAGGATTTGGATGATAAAAGCAAGAATGTTCTCAAAAGATTATACTACGACTACTATTTCCATCGTCAAGAGAATCTTTGGAGGGAAAATGCGTTGAAGACCCTACCCGTCCTTCTGAACTCATCAGACATGCTGGCATGTGGAGAAGATTTGGGTCTTATTCCTTCTTGTGTCCATCCTGTTATGCAAGAGCTGGGATTGGTTGGGTTGCGGATTCAACGCATGCCCAATGAACCTGGTCTGGAGTTTGGTATTCCTTCCCAGTACAGCTACATGACAGTATGCGCCCCGTCTTGTCACGACTGCTCCACCTTGCGTGCCTGGTGGGAAGAAGATGAAGATAGAAGACTGCGCTATTTCAAGAATGTGGTGGAGTCTGATGAGTTACCACCCGATCGATGCACTCCAGAAGTTGCACATTTTGTTATAAGGCAACATGTTGAAGCCCCATCAATGTTGGCAATTTTCCCTCTCCAGGACTTGCTAGCATTAAAAGAAGAATATACTACACGCCCCGCGACAGAGGAGACAATCAATGACCCCACAAATCCAAAGCATTATTGGAGATACCGTGTACATGCCACGCTGGAATCTTTGAACAAGGATACTGAGCTCAAAACCATCATCAAAGATCTTGTTCGTTGGGGCGGAAGATCTTTCCCCCCGGATGAAACTGAAGTATCGTCATCATCAGCATCAGGATCCAACTCCGACAAAGAGCGGCTTGCCAGTGCCATGGAAAAGATCAGTCTTCCTTCCAAATAG 2880 0.4344 MVNTGLLSGSKSVKITFQLPYFTHWGQSLLVCGSVSVLGSWNVKKGVLLTPIHQGAELIWSGSITVPKGFQCQYQYYVVDDNRNVLRSEMGKRRELALPEGIQSGQEIEFRDLWQTGSDGIPFRSAFRDVIFRQSWDPSKEAAAIEANNSKFELEAESIVILFRINCPSIEKDTSICVIGSHEKLGKWKPENGLKLRYCGKSMWQAECLMKRSDFPIRYRYCKYGGAGNVSIENGLNREVSISSSRSEAKYICLSDSMMRETPWRGAGVAIPMFSVRSECDLGVGEFLDLKLLVDWAVASGFHLVQLLPINDTSVHRMWWDSYPYSSLSVFALHPLYLRVQALSKNIPKEIKEEIEKAKQQLDLKDVDYEATMAAKLSIAKKIFDLEKDVILNSSSFKEFFAENEGWLKPYAAFCFLRDFFETSDRTQWGCFAHYSEDKLEKLVSKESLHYEIICFQYYIQYHLHLQLSEAAEYARKRRVVLKGDLPIGVDRNSVDTWVYPNLFRMNTSTGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRIWELPDHAATGLVGKFRPSIPLSQEELEREGIWDFNRLSRPYIRQGLLQQKFGAAWAFVATTFLNEYEKNCYEFKEDCNTEKKVVSKLKSCAESSLLLESEDKLRRTLFDLLQNIVLIQDPEDPRKFYPRFNLEDTSSFKDLDDKSKNVLKRLYYDYYFHRQENLWRENALKTLPVLLNSSDMLACGEDLGLIPSCVHPVMQELGLVGLRIQRMPNEPGLEFGIPSQYSYMTVCAPSCHDCSTLRAWWEEDEDRRLRYFKNVVESDELPPDRCTPEVAHFVIRQHVEAPSMLAIFPLQDLLALKEEYTTRPATEETINDPTNPKHYWRYRVHATLESLNKDTELKTIIKDLVRWGGRSFPPDETEVSSSSASGSNSDKERLASAMEKISLPSK* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2602 959 Pfam Starch binding domain 161 249 IPR002044 GO:2001070
Amo16g2602 959 Pfam Starch binding domain 13 105 IPR002044 GO:2001070
Amo16g2602 959 Gene3D Immunoglobulins 7 116 IPR013783 -
Amo16g2602 959 Gene3D Immunoglobulins 152 257 IPR013783 -
Amo16g2602 959 Gene3D Glycosidases 720 923 - -
Amo16g2602 959 SUPERFAMILY Starch-binding domain-like 9 110 IPR013784 GO:0030246
Amo16g2602 959 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 153 266 IPR002044 GO:2001070
Amo16g2602 959 Gene3D Glycosidases 264 594 - -
Amo16g2602 959 SUPERFAMILY Starch-binding domain-like 157 246 IPR013784 GO:0030246
Amo16g2602 959 MobiDBLite consensus disorder prediction 928 945 - -
Amo16g2602 959 SMART CBM_20_2 158 252 IPR002044 GO:2001070
Amo16g2602 959 SMART CBM_20_2 12 108 IPR002044 GO:2001070
Amo16g2602 959 SUPERFAMILY (Trans)glycosidases 264 917 IPR017853 -
Amo16g2602 959 CDD CBM20_DPE2_repeat1 14 114 IPR034840 GO:2001070
Amo16g2602 959 MobiDBLite consensus disorder prediction 922 959 - -
Amo16g2602 959 Pfam 4-alpha-glucanotransferase 271 899 IPR003385 GO:0004134|GO:0005975
Amo16g2602 959 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 7 116 IPR002044 GO:2001070
Amo16g2602 959 PANTHER - 10 924 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2602 Amo-Chr16 113918436 113927151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2602 13 946 Glycoside Hydrolase AT2G40840 71.872 0.0 1437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2602 K00705 - gmx:100793021 1622.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2602 16 113918436 113927151 Amo16g2602 16 113918436 113927151 ECH