Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2554 ATGGAGATAGAGAAGAATGTTACAAAGGGCAATGGAGAAAGCGTTGCAGAAGAAGAAAGAAACAAAAATATGAAGAGGAAGCAGTGCCGTCAAGGAGGCATAAGAACTTTACCTTTCATCCTTGCAAATGAAGTGTGTGATAGATTTGCGGTGGCTGGATTCTCTGGCAACTTGATAAGTTACCTGACACAAGTGATGAACATGCCATTGGTAGCAGCCTCCAACACACTCACAAACTTTGCTGGAACATCAAGCTTCACTCCTCTCCTTGGTGCTATCATTGCTGAGTCTTTTGCTGGCCGCTTTTGGACCATTACTATTGCTTCTCTCATCTATGAACTGGGAATGATTAGCATGACATTATCAGCTATACTTCCACATTTTCGTCCACCACCATGCCCAAAACAAGTGAATTGCCAAGAAGCCACATCCTCACAGCTATGGATATTATACATGTCTCTACTCCTCACATCTCTTGGCTCAGGTGGCATTAGACCCTGTGTGGTGCCCTTTTCAGGAGACCAATTTGACATGTCCAAAAAGGGTGTGGAGTCCAGAAAGTGGAACCTGTTCAATTGGTATTTTTTCAGCATGGGCTTTGCTTCACTAAGTGCTTTGACAGTTGTGGTTTACATCCAAGACAACATGGGGTGGGGTTGGGGGCTTGGGATTCCAACCATTGCAATGATGATATCCATTGTTGCATTTGTGGTTGGCTTCCCTCTCTATAAGCATGTCAAGCCAGAGGGCAGTCCTTTGATTCGTTTGGCACAAGTGGTTGTGGCTGCTATCAAGAAGAGGAAACAACCTTTGCCTTCTGATGCTAAGCTTTTGTACCAAAATAAGGAGCTTGATGCTAGCATTTCCACAGAAGGAACTCTTCTACACTCTGATCAATTTAAATGGTTGGACAAGGCTGCAATTGTAACAGAGGATGATAGCAGAGACCCAAACGCAGAACCAAAGTTATGGAAACTAGCCACTGTCCACAGAGTAGAAGAGCTGAAATCAATCATCAGAATGCTTCCAATTTGGGCATCAGGAATTTTACAAGTAACAGCCTCATCACACCTCCACAGCTTCGTCATCCAACAAGCTCGATCAATGGACCGCCACCTCTCTCCCTCCTTCCAAATCTCCCCTGCCAGCATGTCCATATTCAGTGTCCTAACCATGATGGTCGGCGTCATACTCTACGAGCGCCTCTTCGTTCCCTTCGCCCGCAGGTTCACCAAGAACCCTGCAGGCATCACATGCCTGCAGAGAATGGGAGTAGGCTTCGTGATCAACATTGTAGCAACTATTATCGCCGCCTTCGTCGAAATCAAGAGGAAGTCTGCCGCAGCAAAGCACCATTTATTGGACGATCCCAAAGCCACGATTCCAATCAGTGTTTTCTGGTTGGTGCCGCAGTATGTAATTCATGGAGTAGCTGAAATTTTTTCGTCTGTTGGACATTTGGAATTCTTGTATGATCAATCGCCTGAAAGTATGAGAAGTAGTGCTACTGCTTTGTATAGCATAACTTCGGCCATTGGGAATTACATTGGAACGTTGTTGGTATCACTGGTTCATGCGTACACTGGTAAAGAGAGAAATTGGTTACCTGATAGGAATCTCAATAGGGGTAGATTGGAGAATTACTACTTTCTTGTTTGTGGGATTCAAGTTGTTAATCTCATTTACTATTCCATTTGTGCTTGGTTTTATACGTACAAGCCTGTGGAGCAGGAAAGTACTAGTGAAATGAACAAGGAGTATCATGATTTGGAACGTGCCAAAGAAAATGTGTCATCTGTTGTTGTAACAGATGGTAGAGAAGAAAATGGAGATTTATAG 1839 0.4399 MEIEKNVTKGNGESVAEEERNKNMKRKQCRQGGIRTLPFILANEVCDRFAVAGFSGNLISYLTQVMNMPLVAASNTLTNFAGTSSFTPLLGAIIAESFAGRFWTITIASLIYELGMISMTLSAILPHFRPPPCPKQVNCQEATSSQLWILYMSLLLTSLGSGGIRPCVVPFSGDQFDMSKKGVESRKWNLFNWYFFSMGFASLSALTVVVYIQDNMGWGWGLGIPTIAMMISIVAFVVGFPLYKHVKPEGSPLIRLAQVVVAAIKKRKQPLPSDAKLLYQNKELDASISTEGTLLHSDQFKWLDKAAIVTEDDSRDPNAEPKLWKLATVHRVEELKSIIRMLPIWASGILQVTASSHLHSFVIQQARSMDRHLSPSFQISPASMSIFSVLTMMVGVILYERLFVPFARRFTKNPAGITCLQRMGVGFVINIVATIIAAFVEIKRKSAAAKHHLLDDPKATIPISVFWLVPQYVIHGVAEIFSSVGHLEFLYDQSPESMRSSATALYSITSAIGNYIGTLLVSLVHAYTGKERNWLPDRNLNRGRLENYYFLVCGIQVVNLIYYSICAWFYTYKPVEQESTSEMNKEYHDLERAKENVSSVVVTDGREENGDL* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2554 612 PANTHER NITRATE TRANSPORTER 1 21 585 - -
Amo16g2554 612 Pfam POT family 102 534 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo16g2554 612 Gene3D MFS general substrate transporter like domains 8 579 IPR036259 -
Amo16g2554 612 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 21 585 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo16g2554 612 SUPERFAMILY MFS general substrate transporter 19 567 IPR036259 -
Amo16g2554 612 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2554 Amo-Chr16 110457796 110464594 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2554 42 582 Organic Solute Cotransporters AT1G68570 59.116 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2554 - - aprc:113861571 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2554 16 110457796 110464594 Amo16g2554 16 110457796 110464594 ECH
Amo16g2554 16 110457796 110464594 Amo06g1832 06 65714735 65717702 hybridization