Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2549 ATGCAAAGAAGAGAGAAGAAAATGGAGATAGAGAAGAGCAACGACAACAATGAATTTTTCAGAGATGAACAGCAAGAGAGTGGCTGCAACAGAAAACAAAAGCGAAAAGGAGGCCTCCGAACATTGCCTTTTATCTTCTCAAACGAATTTTGCGATAGATTTGCGGTGGCGGGATTTAATGGTAACTTGATAAGTTACCTGACACAAGTGATGAACATGCCATTGGTATCTGCATCCAACATACTAACAATAATTGGTGGAACATCGAGCTTCACTCCTCTCCTTGGTGCTCTCATTGCTGAGTCCTTTGCTGGTCAGTATTGGACTATCACTGCCGCTTCCCTCATCTATCAACTGGTAGATGAGACCTTAAATATTGTTTTGTATACCTTGTCATCGCGTACCTTAAATATTGTTTTCACTAAGGGATTGATTTTCACCACTCTGTCTGCTATACTTCCACATACACGGCCTCCACCATGTCCAAAACAAGTGAACTGCCAAGAAGCCACATCCTCACAACTATGGATACTATACATGTCTCTACTCCTCACATCTCTTGGCTCAGGTGGCATTAGACCCTGTAAATGGAACATCTTCAATTGGTACTTCTTTGGCTTGGGTTTGGCGTCTCTAACTGCTTTAACCATTGTGGTTTACATCCAAGACAACACTGGGTGGGGTTGGGGATTTGGCATACCAACAATTGTTATGCTATTTTCTATTCTTGCATTTGTGCTGGGGTCACCACTCTATAGGAATGTGAAACCAAAGGGAAGCCCTTTGGTTCGTTTGGTGCAAGTGATTGTGGCAGCTATAAGGAAGAGGAAAGAGGATTTGCCTAATGATCCTAACCTTTTCTACCAAAATAAGGAGCTTGATGCTCCTATTTCATTGGAAGGAAGACTTCAACACACAGATCAATATAAATGGTTGGACAGAGCTACAATTGTGACAGAAGAAGAAGCTAGAGATCTAAATTCAGCACCAAACCTATGGAAACTAGCCACTGTCCACAGAGTTGAGGAACTAAAATCCATCATTAGAATCATTCCAATTTCTTCAACAGGGATCTTGCTCATAACAGCTTCATCTCATCTTCCAAGCTTTGTAATCCAACAAGCTCGAACAATGAACCGCCACCTCTCTCACTCATTCCAAATCTCCCCAGCAAACATGTCAGTATTCAGTGTCATAACCATGATGGCCGGAGTAGCTCTCTATGACGTCCTCTTTGTCCCCCTCGTCCGCCGCTTCACAAAAAATCCTACAGGAATCACATGCATACAGAGAATGGGAATAGGATTCATGATTAACATTGTGGCCACAGCTATCTCAGCACCGGTCGAAGTCAAAAGAAAAGAAATTGCTTCACATCATAACTTGTTGGATGATCCAACTGCTATTATTCCAATAAGTGTGTTTTGGTTGGTACCTCAGTATTGTTTGCATGGTTTGGCTGATGTTTTTATGTCTGTTGGACTCTTTGAATTTCTCTATGATCAATCACCTGAGAGCATGAGAAGTAGTGCTACTGCTATATATTGCATAGTTATAGCAATTAGGAGCTATGTTGGCACATTTTTGGTGACATTAGTTCATAAGTATAGTGGCAAAAATGAGAAGAATTGGTTGCCTGATAGGAACCTTAATAGGGGTAGATTAGAGTATTATTACTTGCTTGTTAGTGGGGTTCAAGTTTTAAATTTAATTTATTTTGTAATTTGTGTTAGATTCTATACTTATAAACCTGTGGAAGAAAATATTAGCGAAATCAACAATAAGGGAGAAGATTTAGAACAAAATGGTGAAAAATTATTATTGGAGAAACCAAAAGGAGATAAGGATGATCAAAACAAGAGTCTTAGCCAAAAATTCGGCAGTAATGAAGCAGAATTTGGTTCGGGAAATGGTGGCAAGAGTGTGAGGTTGCAGAGCAATGCTTGTGAGGAATAA 1956 0.4013 MQRREKKMEIEKSNDNNEFFRDEQQESGCNRKQKRKGGLRTLPFIFSNEFCDRFAVAGFNGNLISYLTQVMNMPLVSASNILTIIGGTSSFTPLLGALIAESFAGQYWTITAASLIYQLVDETLNIVLYTLSSRTLNIVFTKGLIFTTLSAILPHTRPPPCPKQVNCQEATSSQLWILYMSLLLTSLGSGGIRPCKWNIFNWYFFGLGLASLTALTIVVYIQDNTGWGWGFGIPTIVMLFSILAFVLGSPLYRNVKPKGSPLVRLVQVIVAAIRKRKEDLPNDPNLFYQNKELDAPISLEGRLQHTDQYKWLDRATIVTEEEARDLNSAPNLWKLATVHRVEELKSIIRIIPISSTGILLITASSHLPSFVIQQARTMNRHLSHSFQISPANMSVFSVITMMAGVALYDVLFVPLVRRFTKNPTGITCIQRMGIGFMINIVATAISAPVEVKRKEIASHHNLLDDPTAIIPISVFWLVPQYCLHGLADVFMSVGLFEFLYDQSPESMRSSATAIYCIVIAIRSYVGTFLVTLVHKYSGKNEKNWLPDRNLNRGRLEYYYLLVSGVQVLNLIYFVICVRFYTYKPVEENISEINNKGEDLEQNGEKLLLEKPKGDKDDQNKSLSQKFGSNEAEFGSGNGGKSVRLQSNACEE* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2549 651 PANTHER NITRATE TRANSPORTER 1 137 195 - -
Amo16g2549 651 PANTHER NITRATE TRANSPORTER 1 25 119 - -
Amo16g2549 651 PANTHER NITRATE TRANSPORTER 1 196 595 - -
Amo16g2549 651 MobiDBLite consensus disorder prediction 603 651 - -
Amo16g2549 651 MobiDBLite consensus disorder prediction 622 651 - -
Amo16g2549 651 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 137 195 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo16g2549 651 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 25 119 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo16g2549 651 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 196 595 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo16g2549 651 SUPERFAMILY MFS general substrate transporter 24 583 IPR036259 -
Amo16g2549 651 Coils Coil 3 23 - -
Amo16g2549 651 Gene3D MFS general substrate transporter like domains 11 588 IPR036259 -
Amo16g2549 651 Coils Coil 589 609 - -
Amo16g2549 651 MobiDBLite consensus disorder prediction 1 33 - -
Amo16g2549 651 MobiDBLite consensus disorder prediction 603 621 - -
Amo16g2549 651 Pfam POT family 137 543 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo16g2549 651 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2549 Amo-Chr16 109965187 109968442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2549 47 609 Organic Solute Cotransporters AT1G68570 51.282 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2549 - K14638 gmx:100786998 858.211