Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2486 ATGCCGAGGCAGAACCGAAACGTGGACATGATGATGATACCTGGTAAGATCAGAAAACGAGGTTGCTCGTCATCGGCTTCGTCATCCTCCTCCGTGCTCCATAACTACAGGTTCAAGAGGGCCATACTCGTCGGCAAGAGAGGCGGATCCACCACCCCCGTCCCAACCTGGAAGCTCTTGGCGTCGAGATCTCCGGCGGCGTCGACTTTTCGTGCACTCGACTCCCCTAAGTACCCGCCGTCGCAGTCCGGCGGGGGAGGAGTGAAGGCGAAGCAAGCACCGGTGTCGGCGAGGAAGCTGGCGGCGACGCTGTGGGAGATGAACGAGATCCCTTCGCCGAGCGTGAGGGAAATGCAGCAGGGAGATTCGAAGCTGAAGAAAGAACTCAGAGCGAGAGAAAAGATTGCGAGGTCCATGCGTTCTGGTTCTTTGCCTCCTCACCTGTCTGATCCATCGCACAGTCCTGTATCCGAGAGAATGGATCAATCCGGAACTGGTAGCCGCCATAGAAGAACTCCATCTGTTCCTCAGAGGCCACCTAGGCTTTCAGAGCACCATGTCGGCCCTTTGGATTCCCTTAGTAATGCCAGTCTCATGGAGATTGAAACCAGATCTCGAGCACCGACTCCTGCTTCATCTATTGTTGGAGTTAAAACACGTTTAAAAGATGTTAGTAATGCTTTAACAACATCCAAAGAACTGCTCAAAATTATAAACCGCATGTGGGGACATGAAGATCGCCCTTCCTCCAGTATGTCGCTTATTTCAGCTTTACATACTGAGCTGGAGAGGGCTCGGCTGCAGGTCAATCAGCTAATCCAGGAACAGCGCTCGGATCAAAACGAGATAAGTTACTTGATGAAGTGTTTCGCTGAAGAAAAAGCTGCTTGGAAGAGCAAGGAGCAAGAAATTGTTGAGGCTGCAATTGAATCTGTTGCAGGCGAGCTTGATGTAGAGAGGAAGCTTAGGAGACGGTTTGAAAGCTTGAACAAGAAGCTTGGGAGAGAACTGGCTGAGACCAAAACTTCCCTTCTTAAGGTGGTGAAGGAACTAGAAAGTGAGAAGAGATCAAGAGAAATTATTGAACAAGTATGTGATGAGTTATCAAGAGATGTTAGTGAAGATAAATCCGAGATAGATAAACAAAAGAAATTGTCAACAAAACTTTGTGAAGATGCAGAGAAAGAAAAGGAAATGTTGCAATTAACTGATATGTTGCGTGAGGAGAGAGCTCAGAAGAAACTCTCTGAGGCAAAATATCAGCTTGAGGATAAGAATGCAGCTGTTCATAAGCTCAGGAGTCAACTTGAAGCTTTTTTGGGAAACAAACAAGTTAGAGAAAAAGGACGCAGTTCCAGTCACTTGATTGATGACGAAATTGCTGCATATCTGGGCAAAAGCCGATTCAGTTCCCATCATACCGAAGATGTAGAAGATGATGGTGGAGAGGTTGACGATGGAGTAGAATGTGAGGAAGAATCTGCCGAAAGTGATCTACATTCTATAGAGCTAAACATGGACAACAACAAGAGCTTTAAGTGGAACTACCCTTCTGATAGCAGATTTGATCCAAGATATTCAATTGAGGAAGAAGTTAAAGGGAGGTCTACTACTGTGAGAGCTTCAAGAAGAAGCACATCTCTGCAAAGGAGTATATCAGATGGAGTAGAACGGGTAGTCCAACCTGAGAAGCTTCAAAATTCAGGAGATGGAGTTGACTGGGACAGGTTTTATGAACTAGAGAAGCAAGCTCAAGGAAAAGGTTATGCTGATGAAATGCAAGGCTATAAATCAGTAAAAGGCTTAAGGGATCAAATCTTGGCTGGTTCCCGGCCTGGATCTTCCAGAGGTTATGCCAGTCCAACTAGACAATTTTCACAGCCCTGGCCATCACGAGACCTCACAAACAGCTTCCATGAGAGACCTCCTCTAGTTCAGGGCAATGGTCTAAAATCAAGGTTAGGGGAGGCCAGGGTTGAGGGCCAGAATGTAAGGAAGTCCAAAAGATGA 2010 0.4672 MPRQNRNVDMMMIPGKIRKRGCSSSASSSSSVLHNYRFKRAILVGKRGGSTTPVPTWKLLASRSPAASTFRALDSPKYPPSQSGGGGVKAKQAPVSARKLAATLWEMNEIPSPSVREMQQGDSKLKKELRAREKIARSMRSGSLPPHLSDPSHSPVSERMDQSGTGSRHRRTPSVPQRPPRLSEHHVGPLDSLSNASLMEIETRSRAPTPASSIVGVKTRLKDVSNALTTSKELLKIINRMWGHEDRPSSSMSLISALHTELERARLQVNQLIQEQRSDQNEISYLMKCFAEEKAAWKSKEQEIVEAAIESVAGELDVERKLRRRFESLNKKLGRELAETKTSLLKVVKELESEKRSREIIEQVCDELSRDVSEDKSEIDKQKKLSTKLCEDAEKEKEMLQLTDMLREERAQKKLSEAKYQLEDKNAAVHKLRSQLEAFLGNKQVREKGRSSSHLIDDEIAAYLGKSRFSSHHTEDVEDDGGEVDDGVECEEESAESDLHSIELNMDNNKSFKWNYPSDSRFDPRYSIEEEVKGRSTTVRASRRSTSLQRSISDGVERVVQPEKLQNSGDGVDWDRFYELEKQAQGKGYADEMQGYKSVKGLRDQILAGSRPGSSRGYASPTRQFSQPWPSRDLTNSFHERPPLVQGNGLKSRLGEARVEGQNVRKSKR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2486 669 Coils Coil 664 669 - -
Amo16g2486 669 PANTHER GB|AAF24581.1 12 669 IPR043424 -
Amo16g2486 669 Coils Coil 255 282 - -
Amo16g2486 669 Coils Coil 351 371 - -
Amo16g2486 669 MobiDBLite consensus disorder prediction 137 193 - -
Amo16g2486 669 Coils Coil 408 435 - -
Amo16g2486 669 MobiDBLite consensus disorder prediction 145 172 - -
Amo16g2486 669 PANTHER PLANT/F24K9-26 PROTEIN 12 669 - -
Amo16g2486 669 MobiDBLite consensus disorder prediction 615 634 - -
Amo16g2486 669 MobiDBLite consensus disorder prediction 71 93 - -
Amo16g2486 669 MobiDBLite consensus disorder prediction 607 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2486 Amo-Chr16 105519925 105523802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2486 - - gmx:100783303 1010.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2486 16 105519925 105523802 Amo16g2486 16 105519925 105523802 ECH
Amo16g2486 16 105519925 105523802 Amo06g1789 06 63344155 63348035 hybridization