Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2469 ATGATACTTGCCACACTCTTCTCTCCACTTTCTCTTCTGCTACTCTTATTCTTCTCCATCTCCACCTTGTCTTTTTCCCATTTCGTACCCACTTTCCCTTCTTCATCTAAGTTTCACCCTGAGCTAACCACCCAACTCTCTCGTTCTTCTTCTTCTTCTTCATCAAATGGACTCTACGAGACAAAGTTCTTCACCCAAACGCTCGATCACTTCGATTACACTCCCCAAAGCAATCACAAGTTTCAACAAAGGTACCTCTTCAATGATACCCATTGGGGTGGCGCCAACAACAATGCTCCAATCTTTGTTTACACCGGAAACGAAGGCAACATAGAGTGGTTCACGCAGAACACGGGGTTCATGTTCGAAAACGCGCCACGTTTCCAAGCACTTTTGGTTTTCATTGAGCATAGATTCTACGGAAAATCAGTGCCATTTGGTGGGAACAGGGAGGTTGCATATGCAAATACGAGTACACTTGGGTACCTGAGTTCTACTCAGGCGTTGGCTGATTATGCCACTCTCATTATTGATCTGAAGAAGAATATCTCAGCAATTGATTCCCCTGTTGTGGTGTTTGGTGGATCCTACGGAGGAATGCTTGCTGCGTGGTTCAGAATGAAGTATCCGCACGTTACGATCGGAGCCTTAGCTTCATCTGCCCCAATCCTTCATTTTCCGGGTTTGGTTTCACCCTATGTCTTCTCCGATACTATCGCCAACGACTTCAGGAGTGAGGGTGAGAACTGTTATAACGTCATAAAAAGTTCTTGGAAACAAATAGAGGATGCGGGAAAGACGGATAAAGGATTGAAGCTGCTGCAGAAATCATTCAGATTATGCAAGAATTATAGCTCAGATTTTCTGGAAGGTTGGCTTCAATCGGCGTGGACATATACAGCGATGACAGATTACCCCACACCTTCCAATTTTATGAATCCCTTGCCAGCTTATCCAATCAGAAAGATGTGCGAGGCAATAGAGAAGGAAAAGAAGAGATCAGCATTTGAGAAGCTGTACGCAGCAGCGAATATATATTACAACTACAGCGGCTCTGCCACTTGCTTCGACTTGGATGATCATTCTGATCCCCATGATCTCGGGGGATGGCAATGGCAGGCTTGTTCAGAGATGATTATGCCTCTTGGTGTGAGGAAGGAAAGCATGTTCCCTGAATCTGAATGGTCATACAAAAGTAGATCCGATTCCTGCCAATTCTATTACAATACAACTCCTAGACCCCATTGGATCACCACTGAGTTTGGCGGCTATCATATTCACCAAGTTTTGAAAAGATCCGCCAGCAACATTATCTTCTTTAACGGTTTAAGAGACCCTTGGAGCGGTGGAGGGGTATTAAAGAGTATATCAAAAACTTTAGTAGCCATAGTTGCAAAAGAAGGAGCTCATCACGTAGACCTAAGGTACTCAACTAAGGAAGATCCAAAGTGGCTCACACATGTGAGGGAAAAAGAGATAAAGATCATAGCAAGTTGGATCAAGCGATACTACAGAGACCTACAATTATAA 1530 0.4399 MILATLFSPLSLLLLLFFSISTLSFSHFVPTFPSSSKFHPELTTQLSRSSSSSSSNGLYETKFFTQTLDHFDYTPQSNHKFQQRYLFNDTHWGGANNNAPIFVYTGNEGNIEWFTQNTGFMFENAPRFQALLVFIEHRFYGKSVPFGGNREVAYANTSTLGYLSSTQALADYATLIIDLKKNISAIDSPVVVFGGSYGGMLAAWFRMKYPHVTIGALASSAPILHFPGLVSPYVFSDTIANDFRSEGENCYNVIKSSWKQIEDAGKTDKGLKLLQKSFRLCKNYSSDFLEGWLQSAWTYTAMTDYPTPSNFMNPLPAYPIRKMCEAIEKEKKRSAFEKLYAAANIYYNYSGSATCFDLDDHSDPHDLGGWQWQACSEMIMPLGVRKESMFPESEWSYKSRSDSCQFYYNTTPRPHWITTEFGGYHIHQVLKRSASNIIFFNGLRDPWSGGGVLKSISKTLVAIVAKEGAHHVDLRYSTKEDPKWLTHVREKEIKIIASWIKRYYRDLQL* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2469 509 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 11 507 - -
Amo16g2469 509 Pfam Serine carboxypeptidase S28 66 491 IPR008758 GO:0006508|GO:0008236
Amo16g2469 509 Gene3D alpha/beta hydrolase 63 500 IPR029058 -
Amo16g2469 509 SUPERFAMILY alpha/beta-Hydrolases 118 474 IPR029058 -
Amo16g2469 509 Gene3D Serine carboxypeptidase S28, SKS domain 231 394 IPR042269 -
Amo16g2469 509 PANTHER LYSOSOMAL PRO-X CARBOXYPEPTIDASE-LIKE PROTEIN 11 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2469 Amo-Chr16 104864178 104877243 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2469 K01285 - gmx:100781698 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2469 16 104864178 104877243 Amo16g2469 16 104864178 104877243 ECH