Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2390 ATGGCAACCTGTATGTCCACGTGTTTTGCACCTTCCAATGCTAGGAATTCGGCAGGAGTGCTCGCTGTTGTAGGAGGGAAAACATGTTTCCTCAATCTGTGTGAGACCAAGTATGGATTTTCGAGCGGCAACCGAAAGTCCCCCTTATTGCAAGTTAAGTGTTCTGCCAATTCGCATTTTCACGGTGTTAGTAATTATCATAGTAAAGACCCTTTTCTGGATCTGCATCCAGAGGTGTCAATGCTTAGAGGAGAAGGGAGCAGCAGAGTGAATGACCCAAGAAAGGATAGTTTGGGTGGAAATGTTGCTGAGAGCTTAGAAGCCACATCTACTCCGAGTAATTACAATGAGGCAAAGATCAAAGTCATTGGTGTAGGTGGTGGGGGTTCAAATGCGGTCAATCGCATGATCGAGAGCTCGATGAACGGCATGGAGTTTTGGATTGTTAATACTGATATTCAAGCAATGAGAATGTCACCTGTGTTTCCTGAGAACCGTCTGCAGATTGGTCAAGAGCTTACACGAGGTCTTGGTGCTGGTGGTAACCCTGACATTGGCATGAATGCTGCTAAAGAAAGCAAAGAATCTATAGAAGAGGCAGTTTATGGAGCTGATATGGTCTTTGTTACAGCTGGAATGGGTGGAGGAACTGGCACTGGCGGAGCTCCGGTTATTGCTGGTGTTGCAAAGTCAATGGGTATATTGACTGTTGGTATTGTCACAACCCCTTTCTCATTTGAAGGACGAAGGAGAGCTGTTCAAGCACAAGAAGGAATTGCTTCTTTAAGAGATAACGTTGACACTCTGATCGTTATTCCAAATGACAAGCTGCTGACAGCGGTTTCTCCATCTACCCCTGTAACCGAGGCATTCAATCTGGCTGATGATATCCTTCGCCAAGGTGTTCGTGGCATATCTGATATTATTACGATACCAGGATTGGTGAATGTAGACTTTGCTGATGTTCGAGCTATAATGGCCAATGCAGGTTCCTCACTCATGGGGATAGGGACTGCAACTGGGAAAACAAGGGCTAGAGATGCTGCATTAAATGCTATCCAGTCACCCTTGCTTGATATTGGTATAGAAAGGGCTACTGGAATTGTGTGGAACATCACCGGTGGAAGTGATCTTACATTGTTTGAGGTAAATGCTGCAGCAGAGGTTATATATGACCTTGTGGACCCTACTGCTAACTTAATCTTTGGAGCAGTAATAGATCCATCGCTCAGTGGACAAGTAAGCATAACATTAATTGCAACTGGATTCAAGCGGCAAGAGGAAAGTGAAGGAAGACCCACACAGGCCGTCAACTCGCACAGGGAGATGCCATTGGTGTTGGTCGGCGATCTTCCTCTTTCACCGACGGTAGTTTGGTTGAGATCCCTGAATTCTTAA 1398 0.4549 MATCMSTCFAPSNARNSAGVLAVVGGKTCFLNLCETKYGFSSGNRKSPLLQVKCSANSHFHGVSNYHSKDPFLDLHPEVSMLRGEGSSRVNDPRKDSLGGNVAESLEATSTPSNYNEAKIKVIGVGGGGSNAVNRMIESSMNGMEFWIVNTDIQAMRMSPVFPENRLQIGQELTRGLGAGGNPDIGMNAAKESKESIEEAVYGADMVFVTAGMGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSPSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEESEGRPTQAVNSHREMPLVLVGDLPLSPTVVWLRSLNS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2390 465 Hamap Cell division protein FtsZ [ftsZ]. 115 449 IPR000158 GO:0003924|GO:0005525
Amo16g2390 465 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 1 437 - -
Amo16g2390 465 Gene3D Tubulin/FtsZ, GTPase domain 108 328 IPR036525 -
Amo16g2390 465 Pfam FtsZ family, C-terminal domain 330 424 IPR024757 -
Amo16g2390 465 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 1 437 IPR045061 GO:0003924|GO:0005525
Amo16g2390 465 PRINTS Cell division protein FtsZ signature 206 226 IPR003008 GO:0005525
Amo16g2390 465 PRINTS Cell division protein FtsZ signature 320 341 IPR003008 GO:0005525
Amo16g2390 465 PRINTS Cell division protein FtsZ signature 297 319 IPR003008 GO:0005525
Amo16g2390 465 PRINTS Cell division protein FtsZ signature 234 255 IPR003008 GO:0005525
Amo16g2390 465 SUPERFAMILY Tubulin nucleotide-binding domain-like 118 316 IPR036525 -
Amo16g2390 465 Gene3D - 329 440 IPR037103 -
Amo16g2390 465 CDD FtsZ_type1 130 422 IPR000158 GO:0003924|GO:0005525
Amo16g2390 465 SMART Tubulin_4 119 313 IPR003008 GO:0005525
Amo16g2390 465 ProSitePatterns FtsZ protein signature 2. 205 226 IPR020805 GO:0005525
Amo16g2390 465 SUPERFAMILY Tubulin C-terminal domain-like 312 426 IPR008280 -
Amo16g2390 465 TIGRFAM ftsZ: cell division protein FtsZ 110 433 IPR000158 GO:0003924|GO:0005525
Amo16g2390 465 Pfam Tubulin/FtsZ family, GTPase domain 119 280 IPR003008 GO:0005525
Amo16g2390 465 SMART Tubulin_C_4 315 432 IPR018316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2390 Amo-Chr16 101236316 101241546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2390 K03531 - gmx:100793382 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2390 16 101236316 101241546 Amo16g2390 16 101236316 101241546 ECH
Amo16g2390 16 101236316 101241546 Amo06g1690 06 58309201 58314384 hybridization