Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2340 ATGAAAAGTAACATGGAAAATTTGGAGTGCCAGAGCAAGGATGAAGACAACTGCTATGAAATTTTAAAACAGATTCGTCTGGACCTTTTGGCTTTGTGGTTTGCTGCAGGAAAAAGAAACACTTCTCATTTTAGGCAGCTAGCTGAGGAAAGCATTGCTTCAATTTTCAGACTTTTGACTATTCCACTTATGGGTTCACAAGATATTTTTGGTTATAGTGACTTGCAACATCTCAAAATTCGGCTCACAGAGTATTCAAAGAAAGTAGACCTTTCCAATTGTCCGCAAATAACACCTGCAATACTGCTTCTATCACTTCTCCCTTCATCGTATATAATGGATCCTGCTAAAAAGAAGATTATAGAAAAGTTCTTTATCAACTCTGGACGCCCTTCAAAAGATAGACATGTATTCCCTCAAAGACTCCTGCAAACCACTACCTTTGAGGTAGTTCAGGAGGTGGATATCTCAAAGTGCTGGAGATTGCTTATTGAACATGCTGTTGACTACTTCTGCAAGTCATTTCCTTGTTTAAGAATATTGAAAGCAGCTTATCTATTGAACATTGGGACAATCAGTTTCTTACAATTGTTAGAGAAGTTCCCTTTGGTCTGTGAAATTGACTTGACTGTTGATAGTACCCCAGTAATACCAGCATTATTTACCATTTTATCCTCCAATCCTGCTTTAATACCACCTGTACCACAGAAGGCCTCTATTATTAACAACAAGGCAGTGGAAATCATGCCATTTTATAAATTTGGACCTCCACTTTCCAATGTTACAAGACTCACATTGGAAGGAAGAACTGATGTTTGTGATTCGGTTCTCCTCTATATCTCCAGATTCTGTGTTTCATTGTGTCACCTGAATATTAAAGGATGTATTTCTGTCACCGATGTTGGCATATCAGATCTCATATGCAGGTGTAGAAAACTTAATTCAATTGTGGTTTGTGATACATCATTTGGGATAAATTCAGTTCAAGCTCTTTCCTCGGCTATTTCTGATGGTGGCAATACTTCCTCTATGCATTCTAGAGAGAAACATTTTAATTCTGTAGCATCTAATCTTCAAGAACTGCATATGGGTGGGTGCAAGGGTGTTTCTGATTCATCTTTACTTGAGCTTATGTCTCAGACACAGCTTTTGAAGAGTTTATGCCTGAGAGGGACTGATCTGGTTGACCAGGCGCTTTATAATTTCCTAGGTTCTTCCTTGGAGATGCTTGATGTTTCAAATACCAAGATTTCTGGAGCTGCGTTAGCTCATGTCGTTCATAGAAATCTGAGTTTGAAATGTCTGAAAGCAAAAGATTGTAGAAATCTGTTTCCAGATAACAGTTGTATTAAAAAAAGAGAATGCTGCTTTTTCTCTTTGCATGAAGAACTACATGCTGGGTTCAGAAAAACATATAGCTTGGAAGAAATTGAATTTGGATGGGGTTTTTCTACCTCATCTTTGAGTGATATGGAACCTATAATGATGTCATTAAAGACCATCCATATAGGTTTAGGTGGTATGTTAGGTGAAGATGCACTGAGAAAATTACCTTCAACCTGTCCTTTGCTGGAAAAAATAATTCTTCATTTTCAGGTAATATCAGATGCTATTTTGACAAATATGGTTTCATCCTTGATAAACTTGCAAGAATTATCTCTCTGCTATTGTTTTGGTGATATATCCATGTCAAGCTTCAAATTCTCCATGCAAAGTCTAACGAAGTTGAGGCTTGAAAGAGTAACCCCTTGGATGACAAATGCTGATCTGCTTATTTTAAGTCAGAATTGCAAAAATTTGGTTGAGCTTTCATTGCTAGGATGTCCTAGTCTTAACTCAGATTCTCAAGAGATAATTTCACATGGCTGGCCAGGCTTGATCTCTATCCATTTAGAGGAATGTGGAGAAGTAACATCAAATGGGGTCTCTGCTTTTTTTAACTGCAAAGCTCTTGAAGATCTCCTGTTGCGTCATAATGGTCCTGGGCTACAGAGAAACTTCATTTTGAAAGCTGCTTCGGAGATGCCATTGCTTCGAAAATTGTCACTGGATGTATGTGATGCGAGTGAAGGTGATTTTGACATTCCTGATTATGCAAACAGATACTCGTTGAGTACGGTAAAGATAGCAAGGTGCAAATCTCAAAGATGCGCATTTAATCTCCCAGCCCCTCCAAGAAGATCTGTTCATGTGGAAAGTCTGGTGCTTGTGTGGAACAGCAGAGATCTCACCAGAACCGTGGTGAAGGAACGGCTTTAG 2259 0.3851 MKSNMENLECQSKDEDNCYEILKQIRLDLLALWFAAGKRNTSHFRQLAEESIASIFRLLTIPLMGSQDIFGYSDLQHLKIRLTEYSKKVDLSNCPQITPAILLLSLLPSSYIMDPAKKKIIEKFFINSGRPSKDRHVFPQRLLQTTTFEVVQEVDISKCWRLLIEHAVDYFCKSFPCLRILKAAYLLNIGTISFLQLLEKFPLVCEIDLTVDSTPVIPALFTILSSNPALIPPVPQKASIINNKAVEIMPFYKFGPPLSNVTRLTLEGRTDVCDSVLLYISRFCVSLCHLNIKGCISVTDVGISDLICRCRKLNSIVVCDTSFGINSVQALSSAISDGGNTSSMHSREKHFNSVASNLQELHMGGCKGVSDSSLLELMSQTQLLKSLCLRGTDLVDQALYNFLGSSLEMLDVSNTKISGAALAHVVHRNLSLKCLKAKDCRNLFPDNSCIKKRECCFFSLHEELHAGFRKTYSLEEIEFGWGFSTSSLSDMEPIMMSLKTIHIGLGGMLGEDALRKLPSTCPLLEKIILHFQVISDAILTNMVSSLINLQELSLCYCFGDISMSSFKFSMQSLTKLRLERVTPWMTNADLLILSQNCKNLVELSLLGCPSLNSDSQEIISHGWPGLISIHLEECGEVTSNGVSAFFNCKALEDLLLRHNGPGLQRNFILKAASEMPLLRKLSLDVCDASEGDFDIPDYANRYSLSTVKIARCKSQRCAFNLPAPPRRSVHVESLVLVWNSRDLTRTVVKERL* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2340 752 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN FBL11 5 652 - -
Amo16g2340 752 SUPERFAMILY RNI-like 455 688 - -
Amo16g2340 752 SUPERFAMILY RNI-like 75 441 - -
Amo16g2340 752 SMART LRR_CC_2 83 109 IPR006553 -
Amo16g2340 752 SMART LRR_CC_2 546 576 IPR006553 -
Amo16g2340 752 SMART LRR_CC_2 623 648 IPR006553 -
Amo16g2340 752 SMART LRR_CC_2 404 428 IPR006553 -
Amo16g2340 752 SMART LRR_CC_2 284 309 IPR006553 -
Amo16g2340 752 SMART LRR_CC_2 597 622 IPR006553 -
Amo16g2340 752 SMART LRR_CC_2 355 380 IPR006553 -
Amo16g2340 752 Gene3D Ribonuclease Inhibitor 152 340 IPR032675 -
Amo16g2340 752 Gene3D Ribonuclease Inhibitor 341 734 IPR032675 -
Amo16g2340 752 PANTHER UNCHARACTERIZED 5 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2340 Amo-Chr16 98657469 98665504 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2340 - - adu:107493902 1360.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2340 16 98657469 98665504 Amo06g1631 06 54847075 54855112 hybridization