Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2335 ATGGCATCAGCATTGATGACGGGGGATGATTTAGCCATGTCAACCAGCAGTCGCCGGAGCTGGACCTCTGCCAGCTTCAGGGACGTTTGGACTGCGGCGGCTGAGCCGGACGTGGTGGGGATTGAAATTCCTAAAATTGAAGTCCGGTATGAGAATTTATCTGCGGAGGGAGATTTGTATGTTGGGAGTAGAGCGCTTCCTACTTTGCTTAATGCCACTCTCCACACTTTTGAGAGCATCTTAGGATTGTTTCACCTTGCACCCTCCAAGAAGAAAGAAATTCAGATTCTTAAAGATTCCTCGGGGAAAATCACTTATTGTGGTCATGAGCTAAATGAATTCGTTGCTGGAAAAACTTGTGCCTATATTAGTCAACATGATATTCACTATGGAGAAATGACAGTGAGAGAGACATTAGATTTCTCAGGACGCTGTTTAGGTGTTGGAACGAGGTACGAGATGCTGGTGGAACTGTCAAGAAGGGAGAAAGATGCAGGAATAAAGCCAAACCCTGAAATTGATGCATTCATGAAGGCCACAGCTATGTCAGGCCAAAAAACCAGTTTGGTAACTGATTATGTTCTCAAGATACTTGGAATGGATATTTGTGCTGACATTATGGTTGGTGATGAAATGAGAAGGGGTATCTCTGGTGGACAGAAAAAGCGCTTAACTACAGGGGAGATGTTGGTTGGACCGGCAAAGGTGCTCTTCATGGATGAAATATCAACAGGGTTGGACAGTTCCACCACTTTTCAGATATGCAAGTTCTTGAGACAGATGGTTCATATCATGGATGTGACCATGGTGATTTCTCTTCTGCAGCCAGCACCAGAGACATTTGATCTCTTTGATGACATTATCCTACTTTCAGAAGGCCAAATTGTATACCAAGGTCCGCGCCAGAACGTGCTAGAGTTCTTTGAACAAATGGGATTCAAGTGTCCAGAGAGAAAAGGAGTTGCTGATTTTCTACAAGAAGTAACATCCAAGAAAGACCAGCAACAATATTGGTCTCAAAAAGATGAACCTTATAGATACGTTTCCACTTCTGAATTCGCAGAGGCCTTCAGTTCATTTAAAATAGGTGAACAACTTGTGACTGAGCTTGGGATTCCCTATGATAAGCGTGGAGTCCACCAAGCTGCTTTGGTAAAAAACAAGTATGGCATATCAAACTGGGAACTATTTAAGGCATGCTTCTCAAGAGAATGGTTGCTCATGAAGCGTAGTGCTTTTGTTTATGTATTCAAGACAACACAGATAACAATTATGTCTATCATCACCTTTACTGTGTTCCTTAGAACCCAAATGCCAGTGGGGACTGTCCAAGATGGACAAAAATTCTTTGGAGCACTATTTTTCACTCTAATAAATGTGATGTTTACTGGAATGGCAGAACTAGCCATGACTGTATTCAGGCTTCCAGTGTTCTACAAACAAAGGGATTTTTTGTTCTTCCCTGCATGGTCCTTTGGGTTACCTATATGGGTTCTAAGGATCCCTCTCTTCCTTATGGAATCAGGGATATGGATTGTTCTTACATATTATACTGTTGGGTTTGCTCCTGGTGCTGATAGATTTTTTCGACAATTCTTGGCATTGTTTGGAATCCATCAGATGGCTCTAACACCAGTTGTTGCTAATACACTGGGTACCTTGACCTTGCAAGTCATATTTGTGCTTGAAGGTTTTATTTTTGCCAAAGACGACATTGCGCCATGGATGATATGGGGTTATTATATATCTCCTATGATGTATGGCCAGAATGCCATAGTGATGAATGAATTCTTAGATAAAAGATGGAGTCAACCAAATACAGATCCTAGAATTGATGCACCAACAGTTGGAAAATTACTTCTCAGATATAGAGGTTTCTATACAGAAGATTATTGGTTTTGGATCTGCATTGGAGCCTTGTTTGGGTTTTCTCTTCTTTTCAATCTTCTATTCGTTGTTGCATTGACTTACTTGAATCCTTTGAGTGATTCGAAAGCAGTCATCGCAGATGAAGGTGAAGGGAACAAAATATCATCCTCCAAACAGCTTATCTTTGAAGGTGCAGAGATGGAAATGAAAAATTCTTCAGAAATTTCCGGTCCTTCGAACCAAGAAGAAAGAAGAGGAATGGTTTTACCGTTTGAGCCTTTATCACTTGCATTCAATCATGTTAGCTACTATGTAGATATGCCTGCTGAAATGAAGAATCAAGGTTTCAGTTCAGATAGACTACAACTACTACAAGATGTGAGTGGTGCTTTCAAACCAGGAATATTGACAGCACTTGTAGGTGTTAGTGGCGCGGGGAAGACAACGCTCATGGATGTATTAGCCGGAAGAAAAACAGGTGGTTACATCAAAGGAAATATTAGCATCTCAGGTTATCCAAAGAACCAAGCAACATTTGCTCGGATTAGCGGTTATTGTGAACAGAATGACATTCATTCTCCACATGTTACTGTCTATGAATCACTATTATTCTCAGCATGGCTTCGTCTTCCTTCAGATGTAAAAACAGAAGCACGAAAGATGTTTGTTGAAGAAGTTATGGAGTTGGTCGAGCTTATACCAATCAAAGATGCATTGGTAGGCCTTCCAGGTGTAGATGGCCTATCAACAGAACAAAGGAAGAGGCTTACTATAGCCGTAGAGCTTGTAGCCAACCCTTCAATCATCTTCATGGATGAACCAACATCTGGACTTGATGCTAGAGCTGCAGCGATTGTTATGCGAACCTTGAGAAATACAGTGGACACCGGAAGAACTGTCGTGTGTACAATTCACCAACCTAGCATAGACATTTTTGAGGCCTTTGACGAGCTATTGTTGATGAAAAGAGGAGGACAAGTTATTTATGCTGGTCCACTTGGTCGCCACTCACATAAACTCATAGAATATTTCGAAGCTATCCCTGGAGTTCCTAAAATCAAGGATGGTTATAATCCTGCAACATGGATGCTTGATCTAAGCTCCATTTCAATGGAGGCTCAATTGGATGTAGATTTTGCAGCCATCTATGCCACCTCTGACCTTTATCAGATGAATCAAGAACTCATCAAGGAGCTCAGTACTCCGACCCCAGGTTCCAAAGACTTTCACAAACAACAAGATTTAATGAACCTTTTGGGAGCTATGTACTCTGCTGTGATCTTCCTTGGAGCGACGAACGCTTCAGCAGTACAACCAGTTGTTGCCATTGAAAGAACCGTCTTCTATCGTGAAAGGGCTGCAGGGATGTATTCTGCATTGCCCTATGCATTTGGCCAGGTGGCAATAGAGGCAATTTACAATGCAATTCAAACTGCCATTTACACTATTATCCTCTACTCCATGATTGGTTTCGAATGGAAGGTGGGGAACTTCTTTTGGTTCTACTACTACATTCTAATGTGTTTCATATACTTCACATTGTATGGAATGATGACTGTTGCTTTGACACCTGGTCACCAAGTTGCTGCCATTTGCATGTCCTTCTTTTTGAGCTTTTGGAACTTGTTCTCTGGCTTCCTCATTCCTAGAACGCAAATCCCTGTGTGGTGGAGATGGTACTATTGGGCTTCTCCTGTTGCATGGACATTGTATGGCCTTATCACCTCTCAACTGGGTGACAAGGATGCAGAACTAGAGATACCAGGAAGTGGAACCATGCCACTGAAGCAACTCCTTAAAGATGTTTTGGGTTTTGACTATGACTTCCTTCCGGTGGTTGCTGTTGTTCATGTAGGCTGGGTGCTTCTTTTCTTGTTCGTCTTTGCCTATGGCATCAAATTCCTCAACTTTCAGAAGAGATAG 3792 0.4193 MASALMTGDDLAMSTSSRRSWTSASFRDVWTAAAEPDVVGIEIPKIEVRYENLSAEGDLYVGSRALPTLLNATLHTFESILGLFHLAPSKKKEIQILKDSSGKITYCGHELNEFVAGKTCAYISQHDIHYGEMTVRETLDFSGRCLGVGTRYEMLVELSRREKDAGIKPNPEIDAFMKATAMSGQKTSLVTDYVLKILGMDICADIMVGDEMRRGISGGQKKRLTTGEMLVGPAKVLFMDEISTGLDSSTTFQICKFLRQMVHIMDVTMVISLLQPAPETFDLFDDIILLSEGQIVYQGPRQNVLEFFEQMGFKCPERKGVADFLQEVTSKKDQQQYWSQKDEPYRYVSTSEFAEAFSSFKIGEQLVTELGIPYDKRGVHQAALVKNKYGISNWELFKACFSREWLLMKRSAFVYVFKTTQITIMSIITFTVFLRTQMPVGTVQDGQKFFGALFFTLINVMFTGMAELAMTVFRLPVFYKQRDFLFFPAWSFGLPIWVLRIPLFLMESGIWIVLTYYTVGFAPGADRFFRQFLALFGIHQMALTPVVANTLGTLTLQVIFVLEGFIFAKDDIAPWMIWGYYISPMMYGQNAIVMNEFLDKRWSQPNTDPRIDAPTVGKLLLRYRGFYTEDYWFWICIGALFGFSLLFNLLFVVALTYLNPLSDSKAVIADEGEGNKISSSKQLIFEGAEMEMKNSSEISGPSNQEERRGMVLPFEPLSLAFNHVSYYVDMPAEMKNQGFSSDRLQLLQDVSGAFKPGILTALVGVSGAGKTTLMDVLAGRKTGGYIKGNISISGYPKNQATFARISGYCEQNDIHSPHVTVYESLLFSAWLRLPSDVKTEARKMFVEEVMELVELIPIKDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTLRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGRHSHKLIEYFEAIPGVPKIKDGYNPATWMLDLSSISMEAQLDVDFAAIYATSDLYQMNQELIKELSTPTPGSKDFHKQQDLMNLLGAMYSAVIFLGATNASAVQPVVAIERTVFYRERAAGMYSALPYAFGQVAIEAIYNAIQTAIYTIILYSMIGFEWKVGNFFWFYYYILMCFIYFTLYGMMTVALTPGHQVAAICMSFFLSFWNLFSGFLIPRTQIPVWWRWYYWASPVAWTLYGLITSQLGDKDAELEIPGSGTMPLKQLLKDVLGFDYDFLPVVAVVHVGWVLLFLFVFAYGIKFLNFQKR* 1264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2335 1263 Pfam ABC transporter 747 899 IPR003439 GO:0005524
Amo16g2335 1263 Gene3D - 76 353 IPR027417 -
Amo16g2335 1263 Pfam ABC-2 type transporter 928 989 IPR043926 GO:0140359
Amo16g2335 1263 Pfam ABC-2 type transporter 275 351 IPR043926 GO:0140359
Amo16g2335 1263 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 36 102 - -
Amo16g2335 1263 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 100 1032 - -
Amo16g2335 1263 Pfam ABC-2 type transporter 396 597 IPR013525 GO:0016020|GO:0140359
Amo16g2335 1263 Pfam ABC-2 type transporter 1034 1200 IPR013525 GO:0016020|GO:0140359
Amo16g2335 1263 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 1033 1263 - -
Amo16g2335 1263 Gene3D - 732 966 IPR027417 -
Amo16g2335 1263 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 732 971 IPR003439 GO:0005524
Amo16g2335 1263 Pfam Plant PDR ABC transporter associated 602 668 IPR013581 -
Amo16g2335 1263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 733 956 IPR027417 -
Amo16g2335 1263 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1033 1263 - -
Amo16g2335 1263 PANTHER ATP-BINDING CASSETTE TRANSPORTER 36 102 - -
Amo16g2335 1263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 317 IPR027417 -
Amo16g2335 1263 SMART AAA_5 756 948 IPR003593 -
Amo16g2335 1263 CDD ABCG_PDR_domain2 716 954 IPR034003 -
Amo16g2335 1263 PANTHER ATP-BINDING CASSETTE TRANSPORTER 100 1032 - -
Amo16g2335 1263 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 24 317 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2335 Amo-Chr16 98125775 98133148 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2335 K08711 - gmx:100786482 2046.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2335 16 98125775 98133148 Amo16g2335 16 98125775 98133148 ECH