Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2220 ATGAATGTGTTAGTTGGGCCTTTGGGAAATGAAACCAGAGCCCAAAATATATACAATGCTTCCCCGTTATTCACTCTCTATTCTCTAACCGAAGAACAACAACAACGAATTCGTGTGGGAAGGAACTTTCGCCTCTTTCTCTCTGCCTCGGATTTGAGAAGGTTAAAGGAAATGGCTGGCCCTAGAATCGCTCATGCTACATTGAAAGGACCGAGTGTTGTGAAGGAGATTTGCATTGCGACAGTGCTGGGACTTGCTGCTGGCAGTGTTTGGAAGATGCATCACTGGAATGAACAGAGAAAAGTTAGGGCCTTTTATGATTTGCTTGAGAAAGGTGAGATTAGTGTTATTGCGCAAGAAGAAGTTTTCATCAAGTTTTTCTTTAGATATATTTGTCTGCATCAGGCTAAATGTTTTGATATTGCTTTTCATTCTGAAGTTTAA 444 0.4077 MNVLVGPLGNETRAQNIYNASPLFTLYSLTEEQQQRIRVGRNFRLFLSASDLRRLKEMAGPRIAHATLKGPSVVKEICIATVLGLAAGSVWKMHHWNEQRKVRAFYDLLEKGEISVIAQEEVFIKFFFRYICLHQAKCFDIAFHSEV* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2220 147 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5C-2-RELATED 15 122 IPR008432 GO:0005746
Amo16g2220 147 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5C-2-RELATED 15 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2220 Amo-Chr16 85777806 85778692 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2220 - - adu:107492309 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2220 16 85777806 85778692 Amo16g2220 16 85777806 85778692 ECH