Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2219 ATGATTTCATCAATGGAGAGGCAGAGAAGCTTTTCCTTCAAACCCACAAGGCTTCTGGTCTTCTCATTCATAATCTTCTCCTCCATCTTCTTCATCTCAACCTTCACCATTTGGCTCACCAACTCCACCCCATCACTTCACCAACCCACTATCCATCTTCACTTCAATACCGTTTCTTCTTCTTCTGCTGATGCGGCTGTAGGTGACACTGTTAATGTGGGTCTTCGATCTTTCCCTGTTCAGTTCTTGGCTGGCTCCACCAAAAATTTCACTGGCGAGAGTGTGAAGTTTCCAACTTTTGGGACCCAGAGCAATAGCCTTTTTGGATCCAAATCTGAAGGTGTAGGCCATCATGTTAGTGCTCAAACTGTTAATTTCACTGCAATGCAAGAACATGAAGCTTCAAGTGGAAGGAAGGTAAGCAATGAACAGGAGAAGGTAGCTGCTGGTTCCACTGGGAGAGTTAAAGTTCCGATTTTTGAGAAGATTGAGCAGAAGAAAGCAAAGGGGTGTGATTTGACAAAAGGGTATTGGGCTTTTGATGAAAGTTATCCTCTTTATAGAAAAGATTCGTGCCCTTTTATAGATGAAGGTTTTGATTGTGAGGGGAATGGAAGATTGGATAGAAACTATTCGAAGTGGAGATGGCAACCCAAAGACTGTGATATTCCAAGGTTCAATGCAACAAGAATGCTTGAGTTGATTAGAGGGAAGCGACTAGTTTTCGTGGGTGATTCGATTAATAGGAATCAATGGGAATCAATGTTGTGCATGCTATTGAGTGCTATCAAGGATCCAAAGAGAGTGTATGAAACTCATGGAAGGAAAATTACCAAAGAGAAGGGAAACTATAGTTTCAGGTTTCTGGATTATCAATGCACGGTTGAATACTATGCGAGTCATTTCTTAGTTCATGAAAGCAAGGCAAGGATAGGGCAGAAACGGAGACCGACGTTGCGACTTGACACCATTGATCATGGTTCATCTAGATGGAGAGGAGCTGATATTTTGGTTTTCAACACCGCACATTGGTGGTCACATTACAAAACAAAGGCTGGGATCAACTACTACCAGGAAGGAACTCTAGTACATCCACGGCTAGACGTTTCGACGGCGTTTAGGAAAGCTTTAAAAACATGGGGCTCATGGGTGGACAGGCACATAAATCAAAGGAAAACCAAAGTATTCTTCAGGAGTTCAGCACCATCTCATTTCAGGGGAGGGAATTGGAATTCTGGAGGACACTGCACAGAAGCAACACAACCTCTTAATGAAACCTTAGGTGGCACAGATCCTGAGAAGAATTTAATAACAGAGGAGATGATAAAGCAGATGAAAACTCCAGTGACAATTTTGAACATAACTGGTTTGTCAGAGTACAGAATAGATGGTCACCCATCAATCTATGGAAGAAAAACTCAAACTCGCAGCATACAAGATTGTAGCCATTGGTGCCTTCCAGGGGTACCAGACACATGGAATGAGCTCTTATATTTTCATTTACAAACAAGATGA 1515 0.4231 MISSMERQRSFSFKPTRLLVFSFIIFSSIFFISTFTIWLTNSTPSLHQPTIHLHFNTVSSSSADAAVGDTVNVGLRSFPVQFLAGSTKNFTGESVKFPTFGTQSNSLFGSKSEGVGHHVSAQTVNFTAMQEHEASSGRKVSNEQEKVAAGSTGRVKVPIFEKIEQKKAKGCDLTKGYWAFDESYPLYRKDSCPFIDEGFDCEGNGRLDRNYSKWRWQPKDCDIPRFNATRMLELIRGKRLVFVGDSINRNQWESMLCMLLSAIKDPKRVYETHGRKITKEKGNYSFRFLDYQCTVEYYASHFLVHESKARIGQKRRPTLRLDTIDHGSSRWRGADILVFNTAHWWSHYKTKAGINYYQEGTLVHPRLDVSTAFRKALKTWGSWVDRHINQRKTKVFFRSSAPSHFRGGNWNSGGHCTEATQPLNETLGGTDPEKNLITEEMIKQMKTPVTILNITGLSEYRIDGHPSIYGRKTQTRSIQDCSHWCLPGVPDTWNELLYFHLQTR* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2219 504 Pfam PMR5 N terminal Domain 170 222 IPR025846 -
Amo16g2219 504 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 223 498 IPR026057 GO:0016740
Amo16g2219 504 PANTHER - 119 501 IPR029965 -
Amo16g2219 504 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 119 501 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2219 Amo-Chr16 85771809 85774417 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2219 - - gmx:100819457 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2219 16 85771809 85774417 Amo16g2219 16 85771809 85774417 ECH