Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1926 ATGTCTGTCTATATAATGCTACACTCGCTTTCATTTCCCTTCCTCTTTGAATTCCTCACGTTCCTAGTTTCACTTACGCCTCAACGCAGCAGCACAAAGACCTTTCTCTTCACCTCCGAATCTGTAAATGAAGGTCACCCTGACAAGATCTGTGACCAGGTTTCGGATGCCATCCTTGATGCTTGTTTGGAGCAAGACCCAGAGAGCAAGGTTGCCTGTGAGACCTGTACAAAAACCAACATGGTTATGGTCTTTGGTGAGATCACAACCAAGGCAAATGTGAACTATGAGAAAATAGTTCGAGACACTTGCAGAGGCATTGGGTTCGTTTCAGCTGATGTTGGTCTTGATGCTGACAACTGCAAAGTTCTGGTCAACATTGAGCAACAGAGCCCTGATATTGCCCAAGGAGTTCATGGTCACATGACCAAAAAGCCTGAGGAAATTGGTGCTGGTGACCAGGGACACATGTTTGGCTATGCCACAGATGAAACACCTGAGCTAATGCCACTTACTCATGTCCTTGCTACTAAACTTGGTGCCAAGCTCACTGAAGTTAGAAAGAACAAAACATGCCCATGGGTGAGACCTGATGGAAAAACACAGGTTACTGTTGAGTACAAGAATGATAATGGAGCCATGATCCCGATTCGTGTGCACACTGTCCTCATCTCAACACAACATGATGAAACTGTCACCAATGACAAGATAGCCAGCGATTTGAAGGAGCATGTAATAAAACCTGTCATCCCAGCTAAATACCTTGATGACAAGACTATCTTCCACCTCAACCCTTCTGGTCGTTTTGTGATTGGTGGACCCCATGGAGATGCAGGACTAACTGGCCGTAAGATCATCATTGACACCTATGGTGGTTGGGGTGCTCATGGTGGAGGTGCCTTCTCCGGCAAGGACCCAACCAAGGTTGATAGGAGTGGTGCATACATTGTTAGGCAAGCAGCAAAAAGTGTGGTAGCTTCAGGGCTTGCTCGACGCTGTCTTGTGCAGGTTTCTTATGCAATTGGAGTCCCAGAGCCACTCTCTGTTTTTGTAGACACCTACAAAACAGGAAAGATTCCAGACAAGGACATATTGGCTCTGATTAAGGAAAATTTTGACTTCAGGCCAGGAATGATTGCCATCAATCTTGACCTCATGAGAGGAGGCAACTTCAGGTACCAGAAGACTGCTGCTTACGGACATTTCGGACGTGACGATCCTGATTTCACTTGGGAGACGGTGAAGATGCTCAAGCCCAAGGCTTGA 1266 0.4645 MSVYIMLHSLSFPFLFEFLTFLVSLTPQRSSTKTFLFTSESVNEGHPDKICDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVNYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHMTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWVRPDGKTQVTVEYKNDNGAMIPIRVHTVLISTQHDETVTNDKIASDLKEHVIKPVIPAKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKENFDFRPGMIAINLDLMRGGNFRYQKTAAYGHFGRDDPDFTWETVKMLKPKA* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1926 421 Pfam S-adenosylmethionine synthetase, C-terminal domain 271 412 IPR022630 GO:0004478|GO:0006556
Amo16g1926 421 ProSitePatterns S-adenosylmethionine synthase signature 2. 297 305 IPR022631 GO:0004478|GO:0006556
Amo16g1926 421 ProSitePatterns S-adenosylmethionine synthase signature 1. 150 160 IPR022631 GO:0004478|GO:0006556
Amo16g1926 421 Gene3D - 148 412 - -
Amo16g1926 421 Gene3D - 42 310 - -
Amo16g1926 421 SUPERFAMILY S-adenosylmethionine synthetase 146 270 IPR022636 GO:0004478|GO:0006556
Amo16g1926 421 Pfam S-adenosylmethionine synthetase, N-terminal domain 35 132 IPR022628 GO:0004478|GO:0006556
Amo16g1926 421 Gene3D - 35 273 - -
Amo16g1926 421 SUPERFAMILY S-adenosylmethionine synthetase 271 418 IPR022636 GO:0004478|GO:0006556
Amo16g1926 421 CDD S-AdoMet_synt 36 415 - -
Amo16g1926 421 Hamap S-adenosylmethionine synthase [metK]. 33 421 IPR002133 GO:0004478|GO:0005524|GO:0006556
Amo16g1926 421 TIGRFAM metK: methionine adenosyltransferase 36 418 IPR002133 GO:0004478|GO:0005524|GO:0006556
Amo16g1926 421 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 2 33 421 - -
Amo16g1926 421 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 33 421 IPR002133 GO:0004478|GO:0005524|GO:0006556
Amo16g1926 421 SUPERFAMILY S-adenosylmethionine synthetase 34 140 IPR022636 GO:0004478|GO:0006556
Amo16g1926 421 Pfam S-adenosylmethionine synthetase, central domain 148 269 IPR022629 GO:0004478|GO:0006556
Amo16g1926 421 PIRSF MAT 29 421 IPR002133 GO:0004478|GO:0005524|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1926 Amo-Chr16 52186883 52189261 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1926 K00789 - csv:101222328 765.377