Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1861 ATGATGGTAACTTGGTTTGTGTGGTTGTGTGGGCAGCTTGGTTACACAGTAGGACAGCCACCGGGGTTGGGCATCTGGCGATTTAGACATACCTCTCACAGTCCAAAACCTCAGAATTCATCAAGTAGATCGATTTGCATTGTTGCCCTCCAAATCATGGCTTTAGGTTTTGCCATCGGAGTCTTTGGTGTTCTCATTCTTTTTCACGCCGCTTATTCAACCATCCAATATAGGGGTTTGCTCAAGATCACCGAAGAAGAGTTTTCAGGGCCTCCCTTCAATGTGGTGACTGAGCTATCTCTGGGGCTAGTTCTTTGTATGTGGGCTGCGTTAACTGTGCCGGGGAAGTTTCTGTCCATACACCCAGATTCTGAGGAGAATAGGATTGTTTCTTTGCCTGCTAACCTTGACTTCATGATCTTCAACCACCGAGGCAAGGTCTTCCCCGTGGAAATGGATTTGAAGCTGAAACAATGA 477 0.4675 MMVTWFVWLCGQLGYTVGQPPGLGIWRFRHTSHSPKPQNSSSRSICIVALQIMALGFAIGVFGVLILFHAAYSTIQYRGLLKITEEEFSGPPFNVVTELSLGLVLCMWAALTVPGKFLSIHPDSEENRIVSLPANLDFMIFNHRGKVFPVEMDLKLKQ* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1861 158 Pfam Membrane magnesium transporter 61 121 IPR018937 -
Amo16g1861 158 PANTHER - 53 153 - -
Amo16g1861 158 PANTHER MEMBRANE MAGNESIUM TRANSPORTER 1 53 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1861 Amo-Chr16 46529469 46533665 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1861 K23566 - gmx:100305468 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1861 16 46529469 46533665 Amo16g1861 16 46529469 46533665 ECH
Amo16g1861 16 46529469 46533665 Amo06g1135 06 18114921 18117637 hybridization