Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1847 ATGGGTTTATATGAGCATTCGGATGTTCTTCAATGGGGTCTTAATCTCCTTGATGGTGACCCTAATTTTGGACAAGGATACTATGGTGACATGAGTCAGCAGCACAATAATGCTTGTGACATCTATGACGGACACTACTTCCATAGCCATTATGATAATAACATTAATAATAACAATAACATCAATGACAATGATGATGATGATGATGATGAATGTAACGATGTAGAGAATGATGAGATCATTGCACGTACACTTCAAGAAGAGTTTTCACAGCTAGAGATTGCTGAATGTTCAAGGTATATACAGGGAGGTGAAGAACAATACCATGCTTCTGAGACTCAGCCTGCATATGATTGGCATAACCCTTCAGTGTTGAACTATTGTTCGGGAGATTATGCCCAAGAAGAAGTTGATGATGCAGAACCTTCGAGTTCGTGTTCTAGTCCATGTGAAACAGGGGAATACTCCTTAGAGCTGACTGATAATTATCCACTTGATGATGAAGTAGGGAGACGACTGAGTGAGATGACACTAATTCCTCATGTTCCGAAAATTAATGGAGAAATCCCTTCAGTTGATGAAGCAACATCAGATCATCAAAGGCTTCTAGATAGGTTGCAGTTATATGACTTTGTGGAGCACAAGGTACAAGGTGATGGTAATTGTCAGTTCCGTGCACTATCTGATCAGTTGTTTCATGCACCTGATCGTCACAAGTTTGTTAGACGTCAAGTTGTGAATCAGCTCAAATCTAATCCAGAAATATATGATGGGTATGTCCCCATGGAGTACGGTGACTATTTGGAGAAAATGTCTAGGAGCGGTGAATGGGGTGATCATGTCACACTTCAAGCAGCTGCAGACTCATTTGGTGTGAGAATATTTGTGATGACTTCTTTCAAGGACACCTGCTGTATAGAGATTCTTCCTCATTTTGAGAAGCCAAAAGGAGTGATTTTTCTTAGCTTTTGGGCAGAGGTACATTACAACTCCATCTACCCTCAAGGAGATATACCTTCAGATGAATCAAGAAAGAAGAAACGGTGGTGGAACTTCGGGAGTAAGCACTAG 1071 0.4062 MGLYEHSDVLQWGLNLLDGDPNFGQGYYGDMSQQHNNACDIYDGHYFHSHYDNNINNNNNINDNDDDDDDECNDVENDEIIARTLQEEFSQLEIAECSRYIQGGEEQYHASETQPAYDWHNPSVLNYCSGDYAQEEVDDAEPSSSCSSPCETGEYSLELTDNYPLDDEVGRRLSEMTLIPHVPKINGEIPSVDEATSDHQRLLDRLQLYDFVEHKVQGDGNCQFRALSDQLFHAPDRHKFVRRQVVNQLKSNPEIYDGYVPMEYGDYLEKMSRSGEWGDHVTLQAAADSFGVRIFVMTSFKDTCCIEILPHFEKPKGVIFLSFWAEVHYNSIYPQGDIPSDESRKKKRWWNFGSKH* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1847 356 PANTHER OTU DOMAIN CONTAINING PROTEIN 35 352 - -
Amo16g1847 356 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 35 352 - -
Amo16g1847 356 ProSiteProfiles OTU domain profile. 211 335 IPR003323 -
Amo16g1847 356 Pfam OTU-like cysteine protease 217 303 IPR003323 -
Amo16g1847 356 Gene3D - 192 338 - -
Amo16g1847 356 SUPERFAMILY Cysteine proteinases 197 335 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1847 Amo-Chr16 45352931 45358452 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1847 - - aip:107648617 699.123