Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1828 ATGGCGTCCGAAGGTATTCTTTTGGGCATGGGGAACCCTCTTCTTGACATCTCCGCCGTCGCCGACCACGACTTCCTCCAAAAGTATGACATCACGTTGAATAACGCGATTCTTGCTGAGGACAAGCACAAACCTATGTATGAAGAGATGGCCGAGAAATATAATGTGGAATACATTGCTGGAGGTGCTACTCAGAACTCAATCAGGGTTGCTCAGTGGATGCTTCAAGTACCAGGTGCAACAAGTTACATTGGTTCCATAGGAAAGGATAAGTTTGGGGAAGAGATGAAGAAGAACTCGAAACTTGCTGGTGTAAATGTTCACTACTATGAACATGAAACTACACCTACTGGAACTTGTGCTGTTTGTGTGGTTGGTGGTGAGAGGTCTCTTGTTGCCAACTTATCTGCAGCAAATTGCTACAAGTCTGAGCACTTGAAGAAACCAGAAAATTGGGCATTAGTTGAAAAGGCCGAGTATTTCTATATTGCTGGCTTTTTCCTTACAGTATCCCCAGAATCCATCCAATTAGTTGCTCAGCATGCTGCCGCAAATAACAAGATCTTCACGATGAACCTTTCAGCCCCATTTATATGTGAGTTCTTCAGGGATGTACAAGAGCAGGCTCTGCCGTACATGGACTTCGTTTTTGGAAATGAGACTGAAGCAAGAACGTTTTCCAAAGTTCATGGCTGGGAGACTGATGATATTGAGGAGATAGCACTGAAGATTTCGCAGTGGCCAAAGGCATCAGGAACACACAAAAGGATAACTGTTATTACACAGGGTAAAGATCCTGTTTGTGTTGCTGAGGATGGGAAGGTGAAAAAGTTCCCGGTGGTTCTATTGCCGAAAGAGAAATTAGTTGACACAAATGGAGCAGGGGACGCATTTGTTGGAGGATTTCTTTCACAACTGGTTCAAGAGAAGACTATTGAAGAATGTGTAAGAGCTGGTTGCTATGCAGCAAACGTTATCATCCAAAGGTCTGGCTGCACTTTTCCAGAGAAGCCTGATTTCCATTGA 1026 0.4405 MASEGILLGMGNPLLDISAVADHDFLQKYDITLNNAILAEDKHKPMYEEMAEKYNVEYIAGGATQNSIRVAQWMLQVPGATSYIGSIGKDKFGEEMKKNSKLAGVNVHYYEHETTPTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAEYFYIAGFFLTVSPESIQLVAQHAAANNKIFTMNLSAPFICEFFRDVQEQALPYMDFVFGNETEARTFSKVHGWETDDIEEIALKISQWPKASGTHKRITVITQGKDPVCVAEDGKVKKFPVVLLPKEKLVDTNGAGDAFVGGFLSQLVQEKTIEECVRAGCYAANVIIQRSGCTFPEKPDFH* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1828 341 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 290 303 IPR002173 GO:0016773
Amo16g1828 341 PANTHER - 1 340 IPR001805 GO:0004001|GO:0006166
Amo16g1828 341 Gene3D - 8 327 IPR029056 -
Amo16g1828 341 CDD adenosine_kinase 4 335 - -
Amo16g1828 341 PRINTS Adenosine kinase signature 66 75 IPR001805 GO:0004001|GO:0006166
Amo16g1828 341 PRINTS Adenosine kinase signature 83 97 IPR001805 GO:0004001|GO:0006166
Amo16g1828 341 PRINTS Adenosine kinase signature 114 129 IPR001805 GO:0004001|GO:0006166
Amo16g1828 341 PRINTS Adenosine kinase signature 152 178 IPR001805 GO:0004001|GO:0006166
Amo16g1828 341 PRINTS Adenosine kinase signature 261 280 IPR001805 GO:0004001|GO:0006166
Amo16g1828 341 SUPERFAMILY Ribokinase-like 8 334 IPR029056 -
Amo16g1828 341 Pfam pfkB family carbohydrate kinase 27 335 IPR011611 -
Amo16g1828 341 PANTHER ADENOSINE KINASE 2-LIKE ISOFORM X1 1 340 - -
Amo16g1828 341 Gene3D - 15 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1828 Amo-Chr16 43685523 43688920 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1828 K00856 - gmx:100810561 636.336