Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1822 ATGGAGAGGAATGAGATAAGGCATTCAAAGTTCAAAAGGATTTGTGTGTTCTGCGGAAGTAGCCCCGGCAAGAAAACTACCTACCAAGATGCTGCTATTCAGCTTGCCAACGAATTGGTGTCAAGGAACATTGATCTSGTGTATGGAGGTGGAAGCATTGGGCTAATGGGTTTGGTTTCACAAGCTGTTCATCATGGTGGTAGGCATGTCATTGGAGTTATTCCCAAGACTCTAATGCCTCGAGAGTTAACTGGAGAAACAGTGGGAGAAGTAAAAGCTGTWGCAGATATGCACCAAAGGAAAGCAGAGATGGCAAAGCATTCAGATGCCTTTATTGCCTTACCAGGGGGTTATGGAACACTAGAGGAGCTTCTTGAAGTCATAACCTGGGCACAACTTGGGATTCATGACAAACCGGTGGGGTTAGTGAATGTTGATGGATACTTCAATTCCCTGCTTTCATTCATTGACAAAGCAGTGGAAGAAGGGTTCATTAGCCCAAATGCCCGTCACATAATTGTGTCAGCACCAACAGCAAAAGAGTTRGTCAAGAAATTGGAGGAATACGTTCCATGTCATGAAGGTGTTGCTTCTAAGTTGAGCTGGCAGATGGAACAGCAACTTGCTTACCCTCATCATCAAGATTATGACATCTCAAGGTAG 663 0.4419 MERNEIRHSKFKRICVFCGSSPGKKTTYQDAAIQLANELVSRNIDLVYGGGSIGLMGLVSQAVHHGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISPNARHIIVSAPTAKELVKKLEEYVPCHEGVASKLSWQMEQQLAYPHHQDYDISR* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1822 220 Pfam Possible lysine decarboxylase 56 186 IPR031100 -
Amo16g1822 220 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 4 220 - -
Amo16g1822 220 SUPERFAMILY MCP/YpsA-like 10 189 - -
Amo16g1822 220 TIGRFAM TIGR00730: TIGR00730 family protein 12 189 IPR005269 GO:0009691|GO:0016787
Amo16g1822 220 Gene3D - 1 188 - -
Amo16g1822 220 PANTHER LOG FAMILY PROTEIN YJL055W 4 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1822 Amo-Chr16 41957696 41961110 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1822 K22522 - gmx:100810030 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1822 16 41957696 41961110 Amo16g1822 16 41957696 41961110 ECH