Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1804 ATGGCAAACCCAGTGATCCACTTCTTCGGCATCTTGTTCTTGTTACAAACAATCTCAGCACAAACAATAGCTCCAGCACCAGCAGGACCAACAAACATCACAAAAGTTCTGGAAAAAGCAGGACAGTTCACAACCTTCATCAAGCTCCTCAAGGCCACACAGGTAGCCGATCGGATCAACTCACAGCTCAACAACTCCAACCAAGGCCTCACGATCTTCGCGCCAACCGATAACGCCTTCGCCACCCTCAAATCTGGCACCTTAAACTCCATAAGCACCCAAGACCAGCTCCAACTGGTGCAGTTCCACATTCTCCCGACCCTCTACACCATGTCACAGTTCCAAACCGCAAGTAACCCCTTGCACACGCAAGCCGGTAGCAGCGACGACGGACAGTACCCTCTCAATGTTACTACTTCAGGGAACCAAGTGAATGTCACCACTGGAGTGGTGGACACAACTGTGTCCAACACTATCTACAGTGATAACCAACTTGCTGTGTACCAGGTGGACCAGGTGCTTCTTCCTTTGGCTCTCTTTGGCGCTCCCCCTACCGCGGCTCCTGCCGAGGCTCCAGCTCCGAGTAAGCCGGAGAAGAATGTGAGGGCCGCCTCGGATGCTCCCTCTGGCTCTTCGGATTCGTCCACGGATGCTTCAAATGCAGTGGCTGTGAATGGCTACACAGTGAAAGGAGCATTGGTTGTTGCAGTTATCACTGCCATCATGATGAGTGTTTCTTGGCTGTGA 747 0.5221 MANPVIHFFGILFLLQTISAQTIAPAPAGPTNITKVLEKAGQFTTFIKLLKATQVADRINSQLNNSNQGLTIFAPTDNAFATLKSGTLNSISTQDQLQLVQFHILPTLYTMSQFQTASNPLHTQAGSSDDGQYPLNVTTSGNQVNVTTGVVDTTVSNTIYSDNQLAVYQVDQVLLPLALFGAPPTAAPAEAPAPSKPEKNVRAASDAPSGSSDSSTDASNAVAVNGYTVKGALVVAVITAIMMSVSWL* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1804 248 Gene3D FAS1 domain 15 176 IPR036378 -
Amo16g1804 248 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 242 IPR045003 -
Amo16g1804 248 ProSiteProfiles FAS1/BIgH3 domain profile. 30 174 IPR000782 -
Amo16g1804 248 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 8 242 - -
Amo16g1804 248 SUPERFAMILY FAS1 domain 29 176 IPR036378 -
Amo16g1804 248 MobiDBLite consensus disorder prediction 186 218 - -
Amo16g1804 248 SMART fasc_3 71 177 IPR000782 -
Amo16g1804 248 Pfam Fasciclin domain 42 176 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1804 Amo-Chr16 39806127 39807143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1804 - - mtr:MTR_7g101080 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1804 16 39806127 39807143 Amo16g1804 16 39806127 39807143 ECH