Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo16g1785 | ATGGCGTCTGAAAAGCAACACAATCTTGAGGAGACAAGCCCCCTTCTCCACCAACAACAACCACCAAAACACAGCGATAATCCGAAAGCTGGCCCACCGCCGCCGCCACCTCCCCACTTCCCCGTCGACTGGACCGCAGATGGGCTTCCCGTGGGCCACAGCAGCGTCCTCGGTGAGCCCATGGGCCGCACCCCCTGGAACTCCAGCCTCTGCGCTTGTGTAGGTCAAAACGACCATTTCTGCAGCAGCGATCTCGAAGTTTGCCTTCTTGGGGCTGTGGCTCCTTGTGTGCTGTATGGAAGCAATGTTGAGAGGCTTACATCTACTCCTGGGACATTCGCCAATCATTGCTTGCCGTATTCCGGTATGTATGTGATTGGGAATTCCTGCTTTGGTTGGAATTGCCTTGCACCGTGGTTCTCCTATCCTAGCCGTACTGCCATTCGTCGCAAGTTCAATTTAGAGGGAAGTTGTGAGGCACTTAATAGGTCATGTGGTGGCTGCTGTGGAAGCTTCTTGGAAGATGAAGTGCAGCGCGAACAGTGTGAAACAGCATTTGACTTGGCAACTCACGTCTTCTGTCATGCATGCGCTCTCTGTCAAGAGGGCCGTGAGCTCCGTCGCAGGTTGCCTCATCCAGGCTTTAATGCTCAACCGGTATTGGTTATGATTCCCCCAATGGAGCAGAGTATGGGACGTGGGGCTTAA | 708 | 0.5395 | MASEKQHNLEETSPLLHQQQPPKHSDNPKAGPPPPPPPHFPVDWTADGLPVGHSSVLGEPMGRTPWNSSLCACVGQNDHFCSSDLEVCLLGAVAPCVLYGSNVERLTSTPGTFANHCLPYSGMYVIGNSCFGWNCLAPWFSYPSRTAIRRKFNLEGSCEALNRSCGGCCGSFLEDEVQREQCETAFDLATHVFCHACALCQEGRELRRRLPHPGFNAQPVLVMIPPMEQSMGRGA* | 236 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo16g1785 | 235 | TIGRFAM | A_thal_Cys_rich: uncharacterized Cys-rich domain | 81 | 207 | IPR006461 | - | |
| Amo16g1785 | 235 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Amo16g1785 | 235 | Pfam | PLAC8 family | 66 | 205 | IPR006461 | - | |
| Amo16g1785 | 235 | PANTHER | DUF614 FAMILY PROTEIN-RELATED | 4 | 226 | IPR006461 | - | |
| Amo16g1785 | 235 | MobiDBLite | consensus disorder prediction | 26 | 43 | - | - | |
| Amo16g1785 | 235 | PANTHER | CELL NUMBER REGULATOR 8 | 4 | 226 | - | - | |
| Amo16g1785 | 235 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo16g1785 | Amo-Chr16 | 38572575 | 38578453 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo16g1785 | - | - | adu:107493442 | 505.368 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Amo16g1785 | 16 | 38572575 | 38578453 | Amo16g1785 | 16 | 38572575 | 38578453 | ECH |