Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1623 ATGATGTCAAATAAAACTATAATAACTACAATTACTAGCACAAAAACAGAGATGTGGCGAAGTCGTTTAGGCTCTGCTTTAAGGGCCGCCATAGCGTGCACCATAGTTGGTTGCACCTCAATCTATGGCCCCAAACCTCTCCGGCCCTACTTTGAGTTTTCGACTTATTCTTATGTCACCACTGTTCTAATAGTCTCAGATGCCACACTCGGTGAAACACTAAGAGGTTGCTGGCATGTCCTATGTGCCACCATGCAGGCTATGATCATTTCACTTCTTAGCCTCCTTGTGATAGGACATGGCAACTTCAACAACCGTGTGGCCGCGATGGCAGTTGCGGCTGGCTCCTTTTTCGTGGCGCTGCCGGAATCAGTGGAACTTAGGACTAAGCGGATTGCGTTTGGGCAGCTAGTGATTGTTTATGTGAGTGCAGTGATAGATGGTAAGAAAGAAGCAGTGACAGTGTTCCCAGTTCATGTGGCAACCTCTACTGCTCTTGGAGCTGTGGCTTCAGTTTTGGCCATGTTGTTGCCATACCCTCACCTTGCATATTTTGAGGCGAGGAAATTCTACCAATTATACATTGAGAATACTTCTGAGAGGCTAAATTGCAACATAGAAACCATCTCTGCCTCAGACCACTCAACTGCTGTTACTTTCTTCAATCAAGCCAAGTCCCTCTCCCTAGTAGGACCCAAACTTTTCCAGAGAATAAAAAGCAACCTGAATGGAATACATTGGGAAAGGCCTCACAATCCCCATTGCATTGATCCAAAGGAAAGACTGCAAGACTTGGAGGTACCAATCAGAGGGATGGACATTGCTTTATCAAGCTGCACTTCTTTTCCCATCAGTATCATCGATGAAGAGCTCAGGGGTACCTTGCTCAATTGCAGAGGAAGATTCAGCCAAGAATTAGATCAGCCAGATAAGTTATTTGCACCTCTTGATACAAACACCACCTCTGAAAGCAAGAAGGAAATTTTGATTAAAAGCATTTCCAAAACCTATAAGGATCTGCCAACCTCATTCTTCTTGTACTGTTTGCAACTTCTCTTCGAGAACTCCCCTGTAGCAAAGAAAACTAACCATGTGGCGGAAAGCCCTCCGAAAGATGATGATTTCAAAGGGATTTTCAGAAAGATAAGAGAGGTTTCTATGAAGTCAATCCCCAGCATGGACAGCTTGGTTTTTGCATTCAAGTGCTCGCTTACATTAGGCCTTGCTATGCTATTTGGGTTGACATACAGCAAGGAAAGTGCATATTGGTCAGGGCTTGCGGTCGCCATCAGTTTTGATCCTAGACGTCAACCAACATTCTGGGCTGCAAATGCACGTATGCAGGGAACTGCAATGGGTTCAATCTATGGGGTTCTATGTTGCTTCATTTTCCAAAAATATGTGGATTTAAGGCTCTTGCCTCTTTTGCCATGGGTGGTTTTTTATACATTTCTAAGGCATAGTAGAATGTATGGGCAAGCTGGCGCAATTTCAGCCGTTATAGGGGCCTTACCTATCCTTGGTAGGGAGCACTATGGCCCTCCAAAACAGTTTGCAATTGCCAGAATAGCTGAGGTCACAATTGGACTCATTTGCTTTGTCATTGTAGAGATACTAATGAGTCCTTCAAGAGCAGCAACTCTTGCAAGAACTGAATTTTCTCGAACCTTGAGAGCACTTCAAGATTGCATTGGCAAGATCGCTATTATTGTCCCTAGAGAAAACGACAAATTGTCTTCAAGTTCTCAAGTACTGAGAGCAGCACAGAAAAATATGAGATGTCTGGTGTCTCAAATGGAAGCATTCATAGTAGAAGCTGAGTTAGAACCAAACTTCTGGTTCGTTCCATTTCATGGTGCCTGCTACCGAAAGATGATCCAATCGCTGTCAAGGATGGCAGACCTCTTTCTATTTGTGGCATACTCAATGGAAAATATCTCACAGTTGTCACAACAGGAAGGAGGATCATGGGTGAATCTCCAAGATCAAATGCATGAGAATATAGAAATTATTAAGAACAATGTCTGTCCTACACTGAAATTCTTTGAAGAGATAACCAAAATCAAGTCTCTCACAGAACTAGAAAAGGAATGGACGAAAAGAAACGTTCCTTGCGACATTGAATCAGGAGGATATCCCAATGCAGATACATTTAGGACCATGTCTGGGGATGAGGAAGTGCATAGCATCACGGGCACTTTCCTCAAACACCTGGAGGACATAGCTACCAAAACTCACGCCAACACAAATGAAGAGATGGTTAAATGCCAAATGCTTTTTCATTACAGTTGCTTAGGATTCTGCACTAGTAACTTGGTGAGAGAAATAATGAAGATTGAGAGTGAATTAAGAGAACTACTAATTTGGGAGAATCCATCAAGTCATGCAAACATGAAAGAAATTTATTGTAAGATCAGCACACTCTGTTCGTGGTAA 2436 0.429 MMSNKTIITTITSTKTEMWRSRLGSALRAAIACTIVGCTSIYGPKPLRPYFEFSTYSYVTTVLIVSDATLGETLRGCWHVLCATMQAMIISLLSLLVIGHGNFNNRVAAMAVAAGSFFVALPESVELRTKRIAFGQLVIVYVSAVIDGKKEAVTVFPVHVATSTALGAVASVLAMLLPYPHLAYFEARKFYQLYIENTSERLNCNIETISASDHSTAVTFFNQAKSLSLVGPKLFQRIKSNLNGIHWERPHNPHCIDPKERLQDLEVPIRGMDIALSSCTSFPISIIDEELRGTLLNCRGRFSQELDQPDKLFAPLDTNTTSESKKEILIKSISKTYKDLPTSFFLYCLQLLFENSPVAKKTNHVAESPPKDDDFKGIFRKIREVSMKSIPSMDSLVFAFKCSLTLGLAMLFGLTYSKESAYWSGLAVAISFDPRRQPTFWAANARMQGTAMGSIYGVLCCFIFQKYVDLRLLPLLPWVVFYTFLRHSRMYGQAGAISAVIGALPILGREHYGPPKQFAIARIAEVTIGLICFVIVEILMSPSRAATLARTEFSRTLRALQDCIGKIAIIVPRENDKLSSSSQVLRAAQKNMRCLVSQMEAFIVEAELEPNFWFVPFHGACYRKMIQSLSRMADLFLFVAYSMENISQLSQQEGGSWVNLQDQMHENIEIIKNNVCPTLKFFEEITKIKSLTELEKEWTKRNVPCDIESGGYPNADTFRTMSGDEEVHSITGTFLKHLEDIATKTHANTNEEMVKCQMLFHYSCLGFCTSNLVREIMKIESELRELLIWENPSSHANMKEIYCKISTLCSW* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1623 811 PANTHER F3L24.34 PROTEIN 14 797 - -
Amo16g1623 811 Pfam Fusaric acid resistance protein-like 408 536 - -
Amo16g1623 811 PANTHER P-HYDROXYBENZOIC ACID EFFLUX PUMP SUBUNIT-RELATED 14 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1623 Amo-Chr16 30481659 30484644 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1623 - - ahf:112806027 1461.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1623 16 30481659 30484644 Amo16g1623 16 30481659 30484644 ECH