Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1595 ATGGAGGAGGCGCTGGAACTGGCGAGGGCGAAGGACACGAAGGAGCGGATGGCGGGAGTGGAGAGACTACACCAGGTTCTAGAATCTTCAAGGAAGGCGCTGACGTCATCGGAGGTTACGTCGCTTGTGGACTCGTGCATGGATCTGCTTAAGGACAACAACTTCAGGGTCTCACAGGGCGCTCTTCAGTCCCTAGCCTCCGCCGCAGTCCTCTCCGGCGACCACTTCAAGCTCCATTTTAACGCCCTACTCCCGGCCGTCGTCGATCGTCTCGGTGACGCCAAGCAACCTGTTCGTGATGCCGCCCGCAGGCTCCTGCTCACTCTCATGGAGGTTTCTTCTCCTACAATAATCGTTGAACGAGCAGGATCCTCTGCGTGGGCCCACAGAAGTTGGAGAGTCAGAGAGGAGTTCACACGAACTGTTACATCAGCAATTAATCTATTTTCATCTACTGAGCTTCCACTTCAGCGGGCCATCCTTCCTCCTGTTTTGCATTTGCTCAATGATCCAAACCCTGCCGTTCGTGATGCAGCTATTTTGTGCATTGAGGAGATGTATGCTCAAGCTGGCCCTCAATTTCGTGATGAACTTCAACGCCACAATCTTCCATCATCTTTGGTAAAAGATATTAATGCCAGGCTAGAGGGAATTCAACCGAAAGTCCGCTCTTCAGATGGTGTTCCGAGTGGTTATATCACTGGGGAAATTAAGCCTTTAAATACCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAGACCTCTCTATTCGGAGGGGAAGGTGACGTTACTGAGAAGCCTATAGACCCTATCAAGGTATATTCAGAGAAGGAGTTAACCAGGGAAATTGAGAAGATTGCATCTACTCTTGTACCAGAAAAAGATTGGTCAATTCGTATTGCTGCTATGCAGAGAGTTGAAGGTCTTGTTCTAGGAGGTGTTGCTGATTATCCAAGTTTCCGGGGACTCTTGAAGCAACTTGTTGGACCTTTGAGCACACAGTTGTCTGACAGAAGGTCTAGCATTGTGAAGCAGGCTTGCCATCTACTTTGCTTTTTATCCAAGGAACTCTTGGGGGATTTTGAAGCTTGTGCTGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCAGCAGATAATTGCATAAAAACGATGCTGCGCAACTGCAAAGTTGCTCGTGTGCTTCCTCGTATAGCTGATTGCGCAAAGAATGATCGAAATGCAGTTCTTCGTGCTAGGTGTTGTGAATATGCCCTTTTGGTCCTAGAACATTGGCCTGATGCACCAGAAATACATCGATCAGCTGATTTATACGAGGATATGATAAAGTGTTGTGTTTCAGATGCAATGAGTGAGGTACGATCTACAGCAAGGATATGCTACAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCTCGACGTTTATTCTCATCCTTTGACCCTGTAATCCAGAGGTTAATAAATGAAGAGGATGGAGGAATACATAGGCGACATGCTTCCCCTTCCATTCGTGATAAAGGCGCACTGATGACTTTACCAAGTCAAGCCTCTGCTTCCTCTAATGTACCTGGTTATGGAACTTCTGCTATTGTCGCAATGGATAGAAGTTCAAGTGTATCATCAGGGACATCTGTCTCTTCTGGCATACTTCTTTCACAAGCTAAGTCACTTGGTAAGGGTAATGAACGCAGTTTGGAAAGTGTATTGCATGCTAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGAGGCTTGGATTTGTCTGATAAGCATAATTCGTCTCTCCGGTCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCAGCTGCTGTTCCTGCGTCTAATCATCTAGCAAGCTCTTCAACAACAGAATCAACTACTTCTGGCATCAATAAAAGTAGTAATCGAAATGGTGGTCTTGGTTTATCTGACATAATCACTCAAATTCAAGCTTCGAAAGATTCTGCCAAGTTTTCATATCATAGTAATGTCAGTGCTGAGACTTTATCATCATTATCTTTATATTCAAGTAAAAGGACTTCTGAAAGATTACAGGAAAGACGTTCTTTTGATGATAATAGTGACATTCGAGAGGCTAGGAGATTTATGAAGGCCAACACTGATAAGCATTATTTGGATGCTCCATATAGAGATGTAAACTTAAGGGATTCACATAATAGTAATGTGCCTAATTTCCAGAGGCCGCTGTTGAGAAAGAATGTTACTGGGCGTATGTCTGCTGGCAGGAGGAGGAGTTTTGATGATAACCAGCTTTCTCTTGGAGAGGTGTCAAATTATTCAGATGGTCCAGCATCTCTTCATGAAGCTTTGAGTGAAGGACTTACTTCAGGGTCTGACTGGTCTGCCAGGGTTGCTGCCTTCAATTATCTTCACTCTTTGTTGCAGCTAGGTCCAAAGGGGGTTCAAGAAGTTGTCCAAAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCATTTGGATGATCCCCATCATAAGGTTGCACAGGCTGCTCTTTCTACTCTTGCGGATATAGTTGCAGCATGCCGAAAGCCTTTTGAGGGTTACATGGAAAGAATATTGCCACATGTCTTTTCACGTTTAATAGACCCTAAAGAGCTTGTTAGACAGCCTTGTTCAACCACCTTGGAAGTTGTTAGCAAAACTTACAGTATAGATTCACTCTTACCTGCATTGTTACGCTCACTAGATGAACAAAGGTCTCCCAAGGCTAAGTTGGCTGTTATCGAATTTGCCATCAGTTCTTTTAAGAAGCATGCAATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTAAAATTATGGCTTGCCAAGTTAGCCCCATTGGTTTATGATAAAAATACAAAACTTAAAGAAAATGCCATTACATGCATTATATCAGTGTACTCCCACTTTGATTCAACTGCAGTTCTTAACTTCATACTTAGTTTGTCAGTTGAAGAACAAAATTCTTTGAGACGAGCACTTAAACAATACACTCCTCGCATTGAAGTAGACCTAATGAATTATCTGCAAAGCAAGAAAGATCGGCGTTCTAAGTCTTCCTTTGATCCATCTGATGTTGTGGGGTCATCCTCAGAAGATGGATATGTTGGTTTCTCTAGAAAAGCTCAATACCTTGGAAGGTATTCTGCTGGTTCCTTAGATGGTGATAGTGGCAGAAAGTGGAGTTCTCAAGATTCAACCCTGATTAAAGCCAGTCTTGGCCAGACAGCTTCAGGTGAAATTCAGGAACATTTGTGTCAGAATCTTGAGACAGATTCCACTAGTGGGAGTGTTGGTGCAAAAACTAATGATCTTGCATATGCAGTTAATCCAGTGGGACAAAACTTTGGCTCTCAAACTAGCCAACTTGGACATGTGGACAATAGCTTGAATTATGAGGGTCTTTCAATTCCTCATCTTGATGATAATGGTCTGGTGTCATTAGAGCAATTAAATGATGCTGAAGCATATGTACATGACAAAGAACATTCTTCTGAATTGGAACTGAACCATCACTTAGCTGAAGCTGTAAAGGTTAATTCCATGACTGACACAGGACCCAGCATTCCTCAAATTCTTCATATGATATGCAGCGAGGGTGATGGCAGCCCTATTTCAAGTAAACGGACAGCACTTCAACAGTTAGTTGACGCTTCTATAACAAATGATCATTCTGTTTGGACTAAGTACTTCAATCAGATTTTGACAGTTGTTCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCTTTCTCTTTCACTGATAGTTGAGATGCTTAAAAATCAGAAAGATGCAATGGAGAACTCAGTTGAGATTGTAATTGAGAAGCTGCTTCATGTCACAAAAGATATAATTCCGAAGGTCTCAAGTGAATCAGAGCACTGCCTGAACATTGTTTTGTCCCAGTATGATCCATTCAGATGTTTAAGTGTTATAGTCCCTCTTCTGGTTACAGAGGATGAGAAAACTCTTGTCACTTGCATAAATTGCTTGACAAAGCTTGTTGGCCGGCTGTCTCAAGAGGAACTGATGGCTCAGTTACCTTCATTTCTACCTGCTCTTTTTGAAGCTTTCGGAAACCAGAGTGCAGATGTTCGCAAGACCGTTGTTTTCTGTCTTGTGGACATCTATATCATGCTTGGGAAAGCATTCTTGCCATATTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACTATTTATGCGAATAGAATCTCACAAGCGAGGACAGGCAAAGCCATTGATGCCTCTCATGATTAG 4329 0.4292 MEEALELARAKDTKERMAGVERLHQVLESSRKALTSSEVTSLVDSCMDLLKDNNFRVSQGALQSLASAAVLSGDHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSSAWAHRSWRVREEFTRTVTSAINLFSSTELPLQRAILPPVLHLLNDPNPAVRDAAILCIEEMYAQAGPQFRDELQRHNLPSSLVKDINARLEGIQPKVRSSDGVPSGYITGEIKPLNTKKSSPKAKSSSRETSLFGGEGDVTEKPIDPIKVYSEKELTREIEKIASTLVPEKDWSIRIAAMQRVEGLVLGGVADYPSFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYALLVLEHWPDAPEIHRSADLYEDMIKCCVSDAMSEVRSTARICYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGIHRRHASPSIRDKGALMTLPSQASASSNVPGYGTSAIVAMDRSSSVSSGTSVSSGILLSQAKSLGKGNERSLESVLHASKQKVTAIESMLRGLDLSDKHNSSLRSSSLDLGVDPPSSRDPPFPAAVPASNHLASSSTTESTTSGINKSSNRNGGLGLSDIITQIQASKDSAKFSYHSNVSAETLSSLSLYSSKRTSERLQERRSFDDNSDIREARRFMKANTDKHYLDAPYRDVNLRDSHNSNVPNFQRPLLRKNVTGRMSAGRRRSFDDNQLSLGEVSNYSDGPASLHEALSEGLTSGSDWSARVAAFNYLHSLLQLGPKGVQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVAACRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFKKHAMNPEGAANIGILKLWLAKLAPLVYDKNTKLKENAITCIISVYSHFDSTAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLMNYLQSKKDRRSKSSFDPSDVVGSSSEDGYVGFSRKAQYLGRYSAGSLDGDSGRKWSSQDSTLIKASLGQTASGEIQEHLCQNLETDSTSGSVGAKTNDLAYAVNPVGQNFGSQTSQLGHVDNSLNYEGLSIPHLDDNGLVSLEQLNDAEAYVHDKEHSSELELNHHLAEAVKVNSMTDTGPSIPQILHMICSEGDGSPISSKRTALQQLVDASITNDHSVWTKYFNQILTVVLEVLDDSDSSIRELSLSLIVEMLKNQKDAMENSVEIVIEKLLHVTKDIIPKVSSESEHCLNIVLSQYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDASHD* 1443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1595 1442 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Amo16g1595 1442 MobiDBLite consensus disorder prediction 226 265 - -
Amo16g1595 1442 PANTHER CLASP 28 1434 - -
Amo16g1595 1442 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Amo16g1595 1442 SMART TOG_3 1198 1434 IPR034085 -
Amo16g1595 1442 SMART TOG_3 280 512 IPR034085 -
Amo16g1595 1442 SMART TOG_3 3 224 IPR034085 -
Amo16g1595 1442 SMART TOG_3 778 1023 IPR034085 -
Amo16g1595 1442 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Amo16g1595 1442 Gene3D - 795 1018 IPR011989 -
Amo16g1595 1442 Coils Coil 1278 1298 - -
Amo16g1595 1442 Pfam CLASP N terminal 282 498 IPR024395 -
Amo16g1595 1442 Pfam CLASP N terminal 801 994 IPR024395 -
Amo16g1595 1442 SUPERFAMILY ARM repeat 290 1432 IPR016024 -
Amo16g1595 1442 Gene3D - 1 221 IPR011989 -
Amo16g1595 1442 Gene3D - 1225 1434 IPR011989 -
Amo16g1595 1442 Gene3D - 265 504 IPR011989 -
Amo16g1595 1442 PANTHER PROTEIN, PUTATIVE-RELATED 28 1434 - -
Amo16g1595 1442 MobiDBLite consensus disorder prediction 601 658 - -
Amo16g1595 1442 MobiDBLite consensus disorder prediction 239 259 - -
Amo16g1595 1442 MobiDBLite consensus disorder prediction 633 658 - -
Amo16g1595 1442 SUPERFAMILY ARM repeat 6 400 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1595 Amo-Chr16 29666988 29679547 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1595 K16578 - gmx:100820523 2478.74