Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1593 ATGATTATGAGAGTCCAGCAGGTGGTGATGGCCACAATGGTGGTGACTATTGTTGTTTTTGGTCGAAAGAGAGCTGAGGGAGCTGCTCCCAGAGCTTTCTTTGTGTTTGGAGACTCCCTGGTTGATAGTGGCAACAACAATTACTTGCCAACCACGGCACGCGCCGATTCTCGGCCCTATGGCATCGATTATCCCACTCATCGTCCTACCGGTCGCTTCTCCAATGGCTTCAACCTACCTGACATTATAAGCCAGAGAATTGGGTCTGAGCCCACATTACCGTATCTGAGCCCAGAGTTAAATGGGCCAAAGCTCTTAGTTGGGGCCAACTTTGCTTCTGCTGGGATTGGAATCCTGAATGACACTGGCGTCCAATTTGTGAGGATCTTAAGAATGTATGAGCAGTTTGAGTTGTTTGAAGAATACCAAGAACGTTTAAGTGCAGAAGTGGGGTCAGAAAGGGCAAAGAAAATTGTGAATGGAGCATTGGTGCTGATAACACTTGGTGGTAACGACTTCGTTAACAACTATTTTGTAACTCCATTTTCCCCTAGGTCTCGCCAATTCACCATTTCCCAATTCTCTCGCTACCTTATCTCTGAGTACAGTAAAATTCTAGAGAGGTTGTATGAGTTGGGGGCTCGGAGGGTGTTGGTGTCAGGAACAGGTCCATTGGGATGTGTTCCGTCACAGCTTGCCTCAAAGAGCACCAATGGTGAGTGTGTGCCGGAGTTACAAGAAGCTGCGCAGATTTACAACCCTCTCCTTGTTCAGATGACTAAAGATCTCAACTCCCAAGTTGGTTCTGACGTTTTTGTCGCTGTCAATGCCTTCATTATGAACATGGATTTCATCACCAAACCTCAAACATTTGGTTTTGTTACATCAAAGGTAGCATGTTGTGGACAAGGTCGATACAATGGGATTGGAACGTGCACTTCATTGTCCAACCTTTGTCCAAACCGTGATATCTATGCTTTTTGGGATGCTTTCCACCCAACACAACGTGCGCTTGGTTTCATCGTCGATGCAATCTTTAGTGGAACTAACGACGTTATGAGCCCTATGAACCTTACCACCGTCATGGCCTTGGACTCCAACATTTAA 1107 0.4616 MIMRVQQVVMATMVVTIVVFGRKRAEGAAPRAFFVFGDSLVDSGNNNYLPTTARADSRPYGIDYPTHRPTGRFSNGFNLPDIISQRIGSEPTLPYLSPELNGPKLLVGANFASAGIGILNDTGVQFVRILRMYEQFELFEEYQERLSAEVGSERAKKIVNGALVLITLGGNDFVNNYFVTPFSPRSRQFTISQFSRYLISEYSKILERLYELGARRVLVSGTGPLGCVPSQLASKSTNGECVPELQEAAQIYNPLLVQMTKDLNSQVGSDVFVAVNAFIMNMDFITKPQTFGFVTSKVACCGQGRYNGIGTCTSLSNLCPNRDIYAFWDAFHPTQRALGFIVDAIFSGTNDVMSPMNLTTVMALDSNI* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1593 368 Pfam GDSL-like Lipase/Acylhydrolase 34 340 IPR001087 GO:0016788
Amo16g1593 368 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 365 - -
Amo16g1593 368 CDD SGNH_plant_lipase_like 32 348 IPR035669 -
Amo16g1593 368 Gene3D SGNH hydrolase 22 352 IPR036514 -
Amo16g1593 368 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 365 - -
Amo16g1593 368 SUPERFAMILY SGNH hydrolase 33 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1593 Amo-Chr16 29609901 29611564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1593 32 362 Acyl Lipid Metabolism Gene Families AT4G10950 33.033 5.57e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1593 - - aprc:113860789 579.711