Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1549 ATGGATACAAAAGAAGAGGCTGAACCTCTTGAAGATAAGGTCTCATCCCTAATTTTGCAGCAGATATCTGAGGGGTCATTCAAAGTTGCAGGTGAAGCATCAAAGAGTATGTACTCTGGTGATGCTGCCGGTGGCAGAGGCAGTGGTGATGGTAATGGTAATGGTAACGGTGGTGGTGGCAGTGGTTGTATTGGTGGGGTCGGTGTCGGATCAAGAGTGCCACAAAAGAGGCCTAGTTTATTACATAGAAGAGCTCAAACTGAACTTTTTACCCAAGGGATTCAACGTGTTGACAGCTTTCAGAAGTTGAAGGCTCATGTTAACAAGGCTTTTCGATGGGGAAACAGATTCCGCGAACCAGATTCCCCATCATCAGACTCCCCGTCGCATTTGAGCCTTGAGGTCATGGCGAACCAGAAACGGCAGTGGTATCAGCTTCATCCCAAATCTATGGATTGTGTAAACTATAAGGAGCCAACCACGCTTTTTGAACATTTTGTGATTTTGGGGCTGCATCCTGATACTAACTTGGATGCTGTGGAGCATGCATTTGCTAGAAGGAAACGATGGCAAATAGAGAAAGAAAAATCTGAATATGTAGATTACAAAATGCCAAAGCTAGACACAACTTTGGAACCACAGATACTTTTCAAATATCCTCTTGGAAAGAAGCTAACAGTACCTCGGAAGGAGTTATGCTCCTTTTGCTTTCCTGAAGGTGTAAAGGCATCAATGTTGGAGAGGACTCCATCTCTAAGTGAACTAAATGAACTTGTCTATGGACAGGAACATTTAGGCAGAGATGATCTATCATTTATCTTTACACTCAAGGCAGCAGACAGTGCAACACTTTATGGAGTTTGTTTACATGTGCCTGAAATTGTTCAGAGGCCCCCTGGTATACTAGACATGTATTGTCCTCCATCGCCCCGTCCATTCAGCAGCCGGTTTCTGGTTTCTGCACCACGCTGTTACTGTTTGCTGACTAAAGTTCCTTTCTTTGAGTTACACTTTGAGATGTTATACAGTCTCATTGCACAGGAGCGTCTGAACCGGATAACTCAGTTTGTAAATGAGTTGAATCTTACTGGAGGCATTCCCACGTCGAAGCCAGATGATCAAGTGAGCTTACATGTTGAGTGCCCAGAGACAGAATCATTTAGTGATTGGATGTCTTTTGCAATACCTGTTGAAGGAGCAGCAGTAATTACTGCTGCTGCTGCTGGGATTTTATCGGATGATGAAGTCATACAATTATCACCGAAAGTATGGGAATCTCCGAAAATATGGGAATCTCCGAAAAGATGGGATTCTTGCTCTCAATCTCCTGCAAGTATGACTGCAAGTGATGCTTCAGAGTTTTTCCTGGCTAGAGATATCGAAAAGGATGGCAGGAAGAATGTCCAGGGTCATGATAATTGTGCTGTTGAGACAACAGAAATTCATGATTCTACAGAAAGAACACAGGGGAATGGTGAAAGTGATCAACTTTCTCCCAAGTTTGGAACACCTTTTAGTGCTAGGAGTTGTGAATTAGAGCGGCTTGAAAGTTTGGACTCACTAGCCAGCAGTACAGCTAAAAGTGTGGTTTGGGAAGATGATGATGATCTTTTTGCAAACAATGAAAGAGACTATGGGGATGGCTTCTTAATCGAATTTCCTACGGAGAAGAAGAATGATTTGCTACAGATAGTGCATCGATATCATTCACATTGTATTCCACCTCGAGGAACCGAATTTATCTTCCATCCTCTTGAACATCTACAAGCTATTCAATATATAAGACACTCAGTTGAGGTCCTTGGCTTTAGCAATAGTTTAAATTCCTCTGAACCTGCTCAGGCCAAGGCAAAGTTGGCTGCTGCCGAGGAAGCCTTTGCATTATCAATTTGGACGACTGCAACTACTTGTCGAGTTCTGTCCCTTGAATCTATGCTGTCATTATTTACTGGAGTGTTATTGGAAAAACAGGTGGTAGTAGTGTGCCCCAATCTGGGTGTTCTATCTGCCATAGTGCTATGTCTTATTCCAATGATTCGTCCATTTCAATGGCAGAGTTTATTTCTACCTGTTTTACCTGGATCAATGCTTGATTTTCTTGATGCACCTGTTCCATATATTGTTGGCATACAGCGTATGCCGGATGATTCGCATATGAAAACTAATAACCTTGTTCTTGTTAATGCAACGAAGAATCAGGTTAAAATGTGTCAATTGCCAAAACTTCCACAGTATAGAGAACTTTACTCGCAGTTGAGTCCAATTCATGCCAAACTTAAAAACGAAAGTTCGCATGCTAAAAGACATCCTATACATAGGTGCAATGAAGCTCAGGCTAAAGCTGCAACTCAGTTTTTGAATGTAGTTTGGCACTATTTGGAGTCACTGTGTTCAGATCTAAAATCTCATACAATAACTAGTGTACAATCGAATAACGACCGGGTTTCTTTACTTCTTAAGGAGACATTCATTGATTCATTTCCTAATAGGGACCAGCTATTCATGAAGCTATTTGTAGATACACAACTGTTCAGTGTTTTATCAGATTCTCGTATATCAAGTTTTGAGAGAGGTCAGTTATAG 2583 0.417 MDTKEEAEPLEDKVSSLILQQISEGSFKVAGEASKSMYSGDAAGGRGSGDGNGNGNGGGGSGCIGGVGVGSRVPQKRPSLLHRRAQTELFTQGIQRVDSFQKLKAHVNKAFRWGNRFREPDSPSSDSPSHLSLEVMANQKRQWYQLHPKSMDCVNYKEPTTLFEHFVILGLHPDTNLDAVEHAFARRKRWQIEKEKSEYVDYKMPKLDTTLEPQILFKYPLGKKLTVPRKELCSFCFPEGVKASMLERTPSLSELNELVYGQEHLGRDDLSFIFTLKAADSATLYGVCLHVPEIVQRPPGILDMYCPPSPRPFSSRFLVSAPRCYCLLTKVPFFELHFEMLYSLIAQERLNRITQFVNELNLTGGIPTSKPDDQVSLHVECPETESFSDWMSFAIPVEGAAVITAAAAGILSDDEVIQLSPKVWESPKIWESPKRWDSCSQSPASMTASDASEFFLARDIEKDGRKNVQGHDNCAVETTEIHDSTERTQGNGESDQLSPKFGTPFSARSCELERLESLDSLASSTAKSVVWEDDDDLFANNERDYGDGFLIEFPTEKKNDLLQIVHRYHSHCIPPRGTEFIFHPLEHLQAIQYIRHSVEVLGFSNSLNSSEPAQAKAKLAAAEEAFALSIWTTATTCRVLSLESMLSLFTGVLLEKQVVVVCPNLGVLSAIVLCLIPMIRPFQWQSLFLPVLPGSMLDFLDAPVPYIVGIQRMPDDSHMKTNNLVLVNATKNQVKMCQLPKLPQYRELYSQLSPIHAKLKNESSHAKRHPIHRCNEAQAKAATQFLNVVWHYLESLCSDLKSHTITSVQSNNDRVSLLLKETFIDSFPNRDQLFMKLFVDTQLFSVLSDSRISSFERGQL* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1549 860 PANTHER BNAA09G10210D PROTEIN 72 858 - -
Amo16g1549 860 MobiDBLite consensus disorder prediction 33 57 - -
Amo16g1549 860 Pfam uDENN domain 213 291 IPR005113 -
Amo16g1549 860 Gene3D - 150 369 - -
Amo16g1549 860 SMART uDENN_cls 159 292 IPR005113 -
Amo16g1549 860 ProSiteProfiles Tripartite DENN domain profile. 452 858 IPR037516 -
Amo16g1549 860 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 72 858 - -
Amo16g1549 860 Gene3D - 630 818 IPR043153 -
Amo16g1549 860 MobiDBLite consensus disorder prediction 480 501 - -
Amo16g1549 860 SMART DENN_cls 320 732 IPR001194 -
Amo16g1549 860 Pfam DENN (AEX-3) domain 634 731 IPR001194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1549 Amo-Chr16 28713942 28721630 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1549 - - adu:107491648 1623.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1549 16 28713942 28721630 Amo06g0323 06 4686645 4694357 hybridization